Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.1■■■□□ 2.89
PGK1P00558 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
PGK1P00558 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC33.07■■■□□ 2.88
PGK1P00558 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
PGK1P00558 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC33.05■■■□□ 2.88
PGK1P00558 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.05■■■□□ 2.88
PGK1P00558 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC33.04■■■□□ 2.88
PGK1P00558 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC33.03■■■□□ 2.88
PGK1P00558 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
PGK1P00558 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC33.02■■■□□ 2.88
PGK1P00558 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC33■■■□□ 2.87
PGK1P00558 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.96■■■□□ 2.87
PGK1P00558 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.96■■■□□ 2.87
PGK1P00558 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.95■■■□□ 2.87
PGK1P00558 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.94■■■□□ 2.86
PGK1P00558 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.92■■■□□ 2.86
PGK1P00558 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.88■■■□□ 2.85
PGK1P00558 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
PGK1P00558 RARRES2P7-201ENST00000567349 469 ntBASIC32.84■■■□□ 2.85
PGK1P00558 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.83■■■□□ 2.85
PGK1P00558 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.82■■■□□ 2.85
PGK1P00558 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
PGK1P00558 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.78■■■□□ 2.84
PGK1P00558 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.78■■■□□ 2.84
PGK1P00558 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.69■■■□□ 2.82
PGK1P00558 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PGK1P00558 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.66■■■□□ 2.82
PGK1P00558 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.64■■■□□ 2.82
PGK1P00558 AC097358.2-201ENST00000607541 1159 ntBASIC32.61■■■□□ 2.81
PGK1P00558 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.59■■■□□ 2.81
PGK1P00558 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.58■■■□□ 2.81
PGK1P00558 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
PGK1P00558 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.56■■■□□ 2.8
PGK1P00558 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.56■■■□□ 2.8
PGK1P00558 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PGK1P00558 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.53■■■□□ 2.8
PGK1P00558 AC136428.2-201ENST00000563187 214 ntBASIC32.52■■■□□ 2.8
PGK1P00558 SETD8P1-201ENST00000623146 1180 ntBASIC32.52■■■□□ 2.8
PGK1P00558 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PGK1P00558 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
PGK1P00558 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
PGK1P00558 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.44■■■□□ 2.78
PGK1P00558 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
PGK1P00558 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.43■■■□□ 2.78
PGK1P00558 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.42■■■□□ 2.78
PGK1P00558 SUZ12P1-203ENST00000578195 985 ntBASIC32.39■■■□□ 2.78
PGK1P00558 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PGK1P00558 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PGK1P00558 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PGK1P00558 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.35■■■□□ 2.77
PGK1P00558 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PGK1P00558 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.33■■■□□ 2.77
PGK1P00558 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
PGK1P00558 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.31■■■□□ 2.76
PGK1P00558 RPS2P35-201ENST00000443417 897 ntBASIC32.28■■■□□ 2.76
PGK1P00558 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.28■■■□□ 2.76
PGK1P00558 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PGK1P00558 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.24■■■□□ 2.75
PGK1P00558 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
PGK1P00558 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
PGK1P00558 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.21■■■□□ 2.75
PGK1P00558 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
PGK1P00558 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
PGK1P00558 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PGK1P00558 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PGK1P00558 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC32.17■■■□□ 2.74
PGK1P00558 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
PGK1P00558 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PGK1P00558 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.15■■■□□ 2.74
PGK1P00558 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.14■■■□□ 2.74
PGK1P00558 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
PGK1P00558 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.08■■■□□ 2.73
PGK1P00558 AC145285.7-201ENST00000614819 1539 ntBASIC32.07■■■□□ 2.72
PGK1P00558 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.06■■■□□ 2.72
PGK1P00558 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.01■■■□□ 2.71
PGK1P00558 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32■■■□□ 2.71
PGK1P00558 CAHM-201ENST00000604200 896 ntBASIC31.98■■■□□ 2.71
PGK1P00558 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
PGK1P00558 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PGK1P00558 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
PGK1P00558 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
PGK1P00558 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.91■■■□□ 2.7
PGK1P00558 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PGK1P00558 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.87■■■□□ 2.69
PGK1P00558 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
PGK1P00558 AL162393.1-201ENST00000437852 946 ntBASIC31.83■■■□□ 2.69
PGK1P00558 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PGK1P00558 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PGK1P00558 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PGK1P00558 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PGK1P00558 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PGK1P00558 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PGK1P00558 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.79■■■□□ 2.68
PGK1P00558 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PGK1P00558 AL391121.1-201ENST00000607967 1349 ntBASIC31.78■■■□□ 2.68
PGK1P00558 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PGK1P00558 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.68
PGK1P00558 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PGK1P00558 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.75■■■□□ 2.67
PGK1P00558 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms