Protein–RNA interactions for Protein: O75462

CRLF1, Cytokine receptor-like factor 1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1O75462 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.31■■□□□ 1.48
CRLF1O75462 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CRLF1O75462 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC24.24■■□□□ 1.47
CRLF1O75462 RARRES2P7-201ENST00000567349 469 ntBASIC24.23■■□□□ 1.47
CRLF1O75462 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CRLF1O75462 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CRLF1O75462 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CRLF1O75462 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CRLF1O75462 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CRLF1O75462 AC097358.2-201ENST00000607541 1159 ntBASIC24.09■■□□□ 1.45
CRLF1O75462 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CRLF1O75462 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC24.05■■□□□ 1.44
CRLF1O75462 RPS2P35-201ENST00000443417 897 ntBASIC24.05■■□□□ 1.44
CRLF1O75462 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CRLF1O75462 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.99■■□□□ 1.43
CRLF1O75462 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CRLF1O75462 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.94■■□□□ 1.42
CRLF1O75462 AC136428.2-201ENST00000563187 214 ntBASIC23.94■■□□□ 1.42
CRLF1O75462 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CRLF1O75462 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CRLF1O75462 SUZ12P1-203ENST00000578195 985 ntBASIC23.92■■□□□ 1.42
CRLF1O75462 SETD8P1-201ENST00000623146 1180 ntBASIC23.92■■□□□ 1.42
CRLF1O75462 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CRLF1O75462 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CRLF1O75462 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CRLF1O75462 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CRLF1O75462 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CRLF1O75462 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.83■■□□□ 1.41
CRLF1O75462 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CRLF1O75462 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CRLF1O75462 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CRLF1O75462 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.79■■□□□ 1.4
CRLF1O75462 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CRLF1O75462 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.77■■□□□ 1.4
CRLF1O75462 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.77■■□□□ 1.4
CRLF1O75462 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CRLF1O75462 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CRLF1O75462 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.73■■□□□ 1.39
CRLF1O75462 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.72■■□□□ 1.39
CRLF1O75462 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CRLF1O75462 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CRLF1O75462 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC23.7■■□□□ 1.39
CRLF1O75462 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CRLF1O75462 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.7■■□□□ 1.38
CRLF1O75462 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CRLF1O75462 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.69■■□□□ 1.38
CRLF1O75462 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CRLF1O75462 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.65■■□□□ 1.38
CRLF1O75462 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.6■■□□□ 1.37
CRLF1O75462 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CRLF1O75462 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
CRLF1O75462 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC23.54■■□□□ 1.36
CRLF1O75462 AL162393.1-201ENST00000437852 946 ntBASIC23.54■■□□□ 1.36
CRLF1O75462 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CRLF1O75462 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CRLF1O75462 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.53■■□□□ 1.36
CRLF1O75462 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
CRLF1O75462 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CRLF1O75462 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC23.52■■□□□ 1.36
CRLF1O75462 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
CRLF1O75462 AP006261.1-201ENST00000584783 668 ntBASIC23.52■■□□□ 1.36
CRLF1O75462 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CRLF1O75462 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.51■■□□□ 1.35
CRLF1O75462 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CRLF1O75462 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.5■■□□□ 1.35
CRLF1O75462 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC23.5■■□□□ 1.35
CRLF1O75462 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.45■■□□□ 1.34
CRLF1O75462 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CRLF1O75462 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CRLF1O75462 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CRLF1O75462 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CRLF1O75462 CAHM-201ENST00000604200 896 ntBASIC23.42■■□□□ 1.34
CRLF1O75462 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.41■■□□□ 1.34
CRLF1O75462 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CRLF1O75462 MIR7108-201ENST00000614319 87 ntBASIC23.4■■□□□ 1.34
CRLF1O75462 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CRLF1O75462 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CRLF1O75462 ABHD17AP4-201ENST00000411545 909 ntBASIC23.35■■□□□ 1.33
CRLF1O75462 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CRLF1O75462 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CRLF1O75462 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.32■■□□□ 1.32
CRLF1O75462 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.32■■□□□ 1.32
CRLF1O75462 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CRLF1O75462 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CRLF1O75462 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CRLF1O75462 AL391121.1-201ENST00000607967 1349 ntBASIC23.29■■□□□ 1.32
CRLF1O75462 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CRLF1O75462 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.27■■□□□ 1.32
CRLF1O75462 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.27■■□□□ 1.32
CRLF1O75462 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CRLF1O75462 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CRLF1O75462 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.26■■□□□ 1.31
CRLF1O75462 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.23■■□□□ 1.31
CRLF1O75462 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CRLF1O75462 HLA-V-202ENST00000446817 847 ntBASIC23.21■■□□□ 1.31
CRLF1O75462 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC23.2■■□□□ 1.3
CRLF1O75462 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CRLF1O75462 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CRLF1O75462 MIR3665-201ENST00000578708 105 ntBASIC23.2■■□□□ 1.3
CRLF1O75462 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms