Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
TBC1D4O60343 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
TBC1D4O60343 AL031258.1-201ENST00000623562 325 ntBASIC31.01■■■□□ 2.55
TBC1D4O60343 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
TBC1D4O60343 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
TBC1D4O60343 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
TBC1D4O60343 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TBC1D4O60343 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
TBC1D4O60343 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.9■■■□□ 2.54
TBC1D4O60343 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.89■■■□□ 2.54
TBC1D4O60343 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TBC1D4O60343 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TBC1D4O60343 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
TBC1D4O60343 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.73■■■□□ 2.51
TBC1D4O60343 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.73■■■□□ 2.51
TBC1D4O60343 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
TBC1D4O60343 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.7■■■□□ 2.51
TBC1D4O60343 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
TBC1D4O60343 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.69■■■□□ 2.5
TBC1D4O60343 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.69■■■□□ 2.5
TBC1D4O60343 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TBC1D4O60343 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TBC1D4O60343 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
TBC1D4O60343 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
TBC1D4O60343 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TBC1D4O60343 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.57■■■□□ 2.48
TBC1D4O60343 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.57■■■□□ 2.48
TBC1D4O60343 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
TBC1D4O60343 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.53■■■□□ 2.48
TBC1D4O60343 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TBC1D4O60343 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.49■■■□□ 2.47
TBC1D4O60343 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TBC1D4O60343 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
TBC1D4O60343 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.47■■■□□ 2.47
TBC1D4O60343 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.47■■■□□ 2.47
TBC1D4O60343 AC145285.7-201ENST00000614819 1539 ntBASIC30.46■■■□□ 2.47
TBC1D4O60343 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TBC1D4O60343 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
TBC1D4O60343 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
TBC1D4O60343 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.41■■■□□ 2.46
TBC1D4O60343 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
TBC1D4O60343 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
TBC1D4O60343 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TBC1D4O60343 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TBC1D4O60343 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
TBC1D4O60343 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.31■■■□□ 2.44
TBC1D4O60343 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.31■■■□□ 2.44
TBC1D4O60343 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
TBC1D4O60343 RARRES2P7-201ENST00000567349 469 ntBASIC30.3■■■□□ 2.44
TBC1D4O60343 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TBC1D4O60343 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
TBC1D4O60343 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TBC1D4O60343 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.24■■■□□ 2.43
TBC1D4O60343 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.23■■■□□ 2.43
TBC1D4O60343 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.23■■■□□ 2.43
TBC1D4O60343 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
TBC1D4O60343 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.22■■■□□ 2.43
TBC1D4O60343 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.22■■■□□ 2.43
TBC1D4O60343 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
TBC1D4O60343 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
TBC1D4O60343 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.18■■■□□ 2.42
TBC1D4O60343 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.18■■■□□ 2.42
TBC1D4O60343 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
TBC1D4O60343 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
TBC1D4O60343 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.13■■■□□ 2.41
TBC1D4O60343 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TBC1D4O60343 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.12■■■□□ 2.41
TBC1D4O60343 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.12■■■□□ 2.41
TBC1D4O60343 SETD8P1-201ENST00000623146 1180 ntBASIC30.1■■■□□ 2.41
TBC1D4O60343 AC136428.2-201ENST00000563187 214 ntBASIC30.09■■■□□ 2.41
TBC1D4O60343 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
TBC1D4O60343 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
TBC1D4O60343 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
TBC1D4O60343 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TBC1D4O60343 AC097358.2-201ENST00000607541 1159 ntBASIC30.06■■■□□ 2.4
TBC1D4O60343 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
TBC1D4O60343 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.02■■■□□ 2.4
TBC1D4O60343 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.02■■■□□ 2.4
TBC1D4O60343 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
TBC1D4O60343 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.01■■■□□ 2.39
TBC1D4O60343 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
TBC1D4O60343 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
TBC1D4O60343 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
TBC1D4O60343 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
TBC1D4O60343 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TBC1D4O60343 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
TBC1D4O60343 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.93■■■□□ 2.38
TBC1D4O60343 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
TBC1D4O60343 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.91■■■□□ 2.38
TBC1D4O60343 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.91■■■□□ 2.38
TBC1D4O60343 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
TBC1D4O60343 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.88■■■□□ 2.37
TBC1D4O60343 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TBC1D4O60343 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.87■■■□□ 2.37
TBC1D4O60343 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.87■■■□□ 2.37
TBC1D4O60343 SUZ12P1-203ENST00000578195 985 ntBASIC29.87■■■□□ 2.37
TBC1D4O60343 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
TBC1D4O60343 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TBC1D4O60343 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.81■■■□□ 2.36
TBC1D4O60343 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms