Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV12-3A0A0B4J271 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV12-3A0A0B4J271 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAV12-3A0A0B4J271 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV12-3A0A0B4J271 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV12-3A0A0B4J271 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC21.16■□□□□ 0.98
TRAV12-3A0A0B4J271 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV12-3A0A0B4J271 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV12-3A0A0B4J271 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRAV12-3A0A0B4J271 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV12-3A0A0B4J271 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV12-3A0A0B4J271 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV12-3A0A0B4J271 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV12-3A0A0B4J271 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV12-3A0A0B4J271 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV12-3A0A0B4J271 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV12-3A0A0B4J271 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC21.06■□□□□ 0.96
TRAV12-3A0A0B4J271 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TRAV12-3A0A0B4J271 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV12-3A0A0B4J271 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TRAV12-3A0A0B4J271 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV12-3A0A0B4J271 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV12-3A0A0B4J271 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV12-3A0A0B4J271 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV12-3A0A0B4J271 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV12-3A0A0B4J271 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV12-3A0A0B4J271 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV12-3A0A0B4J271 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAV12-3A0A0B4J271 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.91■□□□□ 0.94
TRAV12-3A0A0B4J271 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
TRAV12-3A0A0B4J271 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV12-3A0A0B4J271 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV12-3A0A0B4J271 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAV12-3A0A0B4J271 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TRAV12-3A0A0B4J271 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAV12-3A0A0B4J271 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAV12-3A0A0B4J271 AC006077.2-201ENST00000623591 457 ntBASIC20.85■□□□□ 0.93
TRAV12-3A0A0B4J271 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
TRAV12-3A0A0B4J271 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV12-3A0A0B4J271 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV12-3A0A0B4J271 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV12-3A0A0B4J271 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV12-3A0A0B4J271 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRAV12-3A0A0B4J271 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV12-3A0A0B4J271 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV12-3A0A0B4J271 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAV12-3A0A0B4J271 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TRAV12-3A0A0B4J271 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
TRAV12-3A0A0B4J271 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAV12-3A0A0B4J271 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV12-3A0A0B4J271 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV12-3A0A0B4J271 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV12-3A0A0B4J271 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV12-3A0A0B4J271 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV12-3A0A0B4J271 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV12-3A0A0B4J271 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV12-3A0A0B4J271 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV12-3A0A0B4J271 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV12-3A0A0B4J271 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV12-3A0A0B4J271 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV12-3A0A0B4J271 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV12-3A0A0B4J271 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV12-3A0A0B4J271 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAV12-3A0A0B4J271 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV12-3A0A0B4J271 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV12-3A0A0B4J271 ZNRF2P1-201ENST00000441407 443 ntBASIC20.7■□□□□ 0.9
TRAV12-3A0A0B4J271 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV12-3A0A0B4J271 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV12-3A0A0B4J271 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.69■□□□□ 0.9
TRAV12-3A0A0B4J271 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV12-3A0A0B4J271 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV12-3A0A0B4J271 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV12-3A0A0B4J271 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV12-3A0A0B4J271 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV12-3A0A0B4J271 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV12-3A0A0B4J271 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRAV12-3A0A0B4J271 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.62■□□□□ 0.89
TRAV12-3A0A0B4J271 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAV12-3A0A0B4J271 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV12-3A0A0B4J271 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV12-3A0A0B4J271 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV12-3A0A0B4J271 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRAV12-3A0A0B4J271 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAV12-3A0A0B4J271 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV12-3A0A0B4J271 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRAV12-3A0A0B4J271 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV12-3A0A0B4J271 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAV12-3A0A0B4J271 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV12-3A0A0B4J271 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.56■□□□□ 0.88
TRAV12-3A0A0B4J271 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV12-3A0A0B4J271 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAV12-3A0A0B4J271 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.56■□□□□ 0.88
TRAV12-3A0A0B4J271 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV12-3A0A0B4J271 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV12-3A0A0B4J271 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAV12-3A0A0B4J271 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV12-3A0A0B4J271 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV12-3A0A0B4J271 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV12-3A0A0B4J271 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV12-3A0A0B4J271 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms