Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC22.38■■□□□ 1.17
TRAV5A0A0B4J249 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.37■■□□□ 1.17
TRAV5A0A0B4J249 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.37■■□□□ 1.17
TRAV5A0A0B4J249 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
TRAV5A0A0B4J249 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV5A0A0B4J249 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRAV5A0A0B4J249 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRAV5A0A0B4J249 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRAV5A0A0B4J249 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRAV5A0A0B4J249 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRAV5A0A0B4J249 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.28■■□□□ 1.16
TRAV5A0A0B4J249 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.28■■□□□ 1.16
TRAV5A0A0B4J249 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRAV5A0A0B4J249 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRAV5A0A0B4J249 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TRAV5A0A0B4J249 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
TRAV5A0A0B4J249 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRAV5A0A0B4J249 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRAV5A0A0B4J249 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRAV5A0A0B4J249 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAV5A0A0B4J249 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRAV5A0A0B4J249 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRAV5A0A0B4J249 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV5A0A0B4J249 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV5A0A0B4J249 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV5A0A0B4J249 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV5A0A0B4J249 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRAV5A0A0B4J249 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC22.12■■□□□ 1.13
TRAV5A0A0B4J249 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.12■■□□□ 1.13
TRAV5A0A0B4J249 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRAV5A0A0B4J249 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV5A0A0B4J249 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC22.09■■□□□ 1.13
TRAV5A0A0B4J249 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
TRAV5A0A0B4J249 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRAV5A0A0B4J249 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRAV5A0A0B4J249 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRAV5A0A0B4J249 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRAV5A0A0B4J249 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TRAV5A0A0B4J249 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
TRAV5A0A0B4J249 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRAV5A0A0B4J249 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC22.04■■□□□ 1.12
TRAV5A0A0B4J249 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRAV5A0A0B4J249 INO80B-203ENST00000409917 796 ntTSL 2 BASIC22.02■■□□□ 1.12
TRAV5A0A0B4J249 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRAV5A0A0B4J249 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRAV5A0A0B4J249 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
TRAV5A0A0B4J249 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRAV5A0A0B4J249 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRAV5A0A0B4J249 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.97■■□□□ 1.11
TRAV5A0A0B4J249 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC21.96■■□□□ 1.11
TRAV5A0A0B4J249 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV5A0A0B4J249 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.94■■□□□ 1.1
TRAV5A0A0B4J249 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAV5A0A0B4J249 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRAV5A0A0B4J249 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRAV5A0A0B4J249 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRAV5A0A0B4J249 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRAV5A0A0B4J249 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRAV5A0A0B4J249 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRAV5A0A0B4J249 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRAV5A0A0B4J249 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRAV5A0A0B4J249 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRAV5A0A0B4J249 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV5A0A0B4J249 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRAV5A0A0B4J249 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV5A0A0B4J249 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV5A0A0B4J249 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRAV5A0A0B4J249 AC015813.7-201ENST00000623294 581 ntBASIC21.84■■□□□ 1.09
TRAV5A0A0B4J249 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TRAV5A0A0B4J249 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV5A0A0B4J249 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.82■■□□□ 1.08
TRAV5A0A0B4J249 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV5A0A0B4J249 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV5A0A0B4J249 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV5A0A0B4J249 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV5A0A0B4J249 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV5A0A0B4J249 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.78■■□□□ 1.08
TRAV5A0A0B4J249 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TRAV5A0A0B4J249 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TRAV5A0A0B4J249 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV5A0A0B4J249 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV5A0A0B4J249 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.74■■□□□ 1.07
TRAV5A0A0B4J249 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV5A0A0B4J249 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TRAV5A0A0B4J249 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.72■■□□□ 1.07
TRAV5A0A0B4J249 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV5A0A0B4J249 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TRAV5A0A0B4J249 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV5A0A0B4J249 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV5A0A0B4J249 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV5A0A0B4J249 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TRAV5A0A0B4J249 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV5A0A0B4J249 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRAV5A0A0B4J249 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.66■■□□□ 1.06
TRAV5A0A0B4J249 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV5A0A0B4J249 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC21.64■■□□□ 1.06
TRAV5A0A0B4J249 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV5A0A0B4J249 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.63■■□□□ 1.05
TRAV5A0A0B4J249 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV5A0A0B4J249 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms