Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 LINC00554-201ENST00000564841 3011 ntBASIC15.32■□□□□ 0.04
VPS37AQ8NEZ2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.32■□□□□ 0.04
VPS37AQ8NEZ2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS37AQ8NEZ2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS37AQ8NEZ2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.32■□□□□ 0.04
VPS37AQ8NEZ2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS37AQ8NEZ2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS37AQ8NEZ2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS37AQ8NEZ2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 AC112191.1-201ENST00000523689 701 ntBASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 AC145285.3-201ENST00000564603 959 ntBASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 AC024267.1-201ENST00000582320 895 ntBASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 SLC25A6P4-201ENST00000586535 553 ntBASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 AC064836.3-201ENST00000607928 673 ntBASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS37AQ8NEZ2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 AC073347.1-201ENST00000421633 2643 ntBASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 AC074386.1-202ENST00000463561 864 ntBASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 AC104109.2-201ENST00000602919 1418 ntBASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 AC068137.2-201ENST00000605408 478 ntBASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS37AQ8NEZ2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms