Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TNRC18P2-201ENST00000417666 2714 ntBASIC16.9■□□□□ 0.3
CHRNA3P32297 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.9■□□□□ 0.3
CHRNA3P32297 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CHRNA3P32297 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHRNA3P32297 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CHRNA3P32297 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CHRNA3P32297 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNA3P32297 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNA3P32297 RN7SL589P-201ENST00000481268 310 ntBASIC16.9■□□□□ 0.3
CHRNA3P32297 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CHRNA3P32297 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNA3P32297 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNA3P32297 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.9■□□□□ 0.3
CHRNA3P32297 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNA3P32297 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNA3P32297 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 AC068418.2-201ENST00000577309 3703 ntBASIC16.9■□□□□ 0.3
CHRNA3P32297 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CHRNA3P32297 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNA3P32297 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA3P32297 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.89■□□□□ 0.3
CHRNA3P32297 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.89■□□□□ 0.3
CHRNA3P32297 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.89■□□□□ 0.3
CHRNA3P32297 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CHRNA3P32297 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHRNA3P32297 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHRNA3P32297 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHRNA3P32297 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHRNA3P32297 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 AP003680.1-201ENST00000598970 3660 ntBASIC16.89■□□□□ 0.29
CHRNA3P32297 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNA3P32297 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNA3P32297 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNA3P32297 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHRNA3P32297 AC079140.1-201ENST00000508039 487 ntBASIC16.89■□□□□ 0.29
CHRNA3P32297 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHRNA3P32297 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNA3P32297 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 AC243562.1-201ENST00000560672 389 ntBASIC16.89■□□□□ 0.29
CHRNA3P32297 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CHRNA3P32297 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRNA3P32297 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRNA3P32297 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRNA3P32297 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 AC006486.2-201ENST00000624246 2199 ntBASIC16.89■□□□□ 0.29
CHRNA3P32297 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA3P32297 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CHRNA3P32297 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA3P32297 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.88■□□□□ 0.29
CHRNA3P32297 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 WASH6P-202ENST00000359512 1437 ntBASIC16.88■□□□□ 0.29
CHRNA3P32297 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.88■□□□□ 0.29
CHRNA3P32297 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.88■□□□□ 0.29
CHRNA3P32297 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 AL592309.1-201ENST00000443127 649 ntBASIC16.88■□□□□ 0.29
CHRNA3P32297 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA3P32297 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.88■□□□□ 0.29
CHRNA3P32297 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.88■□□□□ 0.29
CHRNA3P32297 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms