Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHA3P29320 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
EPHA3P29320 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
EPHA3P29320 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.61■□□□□ 0.09
EPHA3P29320 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.61■□□□□ 0.09
EPHA3P29320 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHA3P29320 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.61■□□□□ 0.09
EPHA3P29320 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
EPHA3P29320 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
EPHA3P29320 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
EPHA3P29320 AC117500.6-201ENST00000624871 588 ntBASIC15.61■□□□□ 0.09
EPHA3P29320 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 AL589702.1-201ENST00000641229 1509 ntBASIC15.61■□□□□ 0.09
EPHA3P29320 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.61■□□□□ 0.09
EPHA3P29320 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
EPHA3P29320 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.61■□□□□ 0.09
EPHA3P29320 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
EPHA3P29320 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHA3P29320 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
EPHA3P29320 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.6■□□□□ 0.09
EPHA3P29320 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 AC073439.1-201ENST00000624121 1774 ntBASIC15.6■□□□□ 0.09
EPHA3P29320 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
EPHA3P29320 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.6■□□□□ 0.09
EPHA3P29320 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 KRT18P34-201ENST00000488218 1270 ntBASIC15.6■□□□□ 0.09
EPHA3P29320 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 MIR4751-201ENST00000578027 74 ntBASIC15.6■□□□□ 0.09
EPHA3P29320 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.6■□□□□ 0.09
EPHA3P29320 MIR4321-201ENST00000592276 80 ntBASIC15.6■□□□□ 0.09
EPHA3P29320 TP73-AS1-207ENST00000624167 988 ntBASIC15.6■□□□□ 0.09
EPHA3P29320 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.6■□□□□ 0.09
EPHA3P29320 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
EPHA3P29320 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.6■□□□□ 0.09
EPHA3P29320 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
EPHA3P29320 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
EPHA3P29320 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
EPHA3P29320 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
EPHA3P29320 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.6■□□□□ 0.09
EPHA3P29320 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
EPHA3P29320 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
EPHA3P29320 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
EPHA3P29320 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
EPHA3P29320 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
EPHA3P29320 AL161772.1-201ENST00000610494 4412 ntBASIC15.59■□□□□ 0.09
EPHA3P29320 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
EPHA3P29320 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
EPHA3P29320 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
EPHA3P29320 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
EPHA3P29320 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.59■□□□□ 0.09
EPHA3P29320 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
EPHA3P29320 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
EPHA3P29320 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
EPHA3P29320 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
EPHA3P29320 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
EPHA3P29320 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
EPHA3P29320 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.59■□□□□ 0.09
EPHA3P29320 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.59■□□□□ 0.09
EPHA3P29320 CICP23-201ENST00000605013 2741 ntBASIC15.59■□□□□ 0.09
EPHA3P29320 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
EPHA3P29320 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms