Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 HBZP1-201ENST00000354915 429 ntBASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 MIR1238-201ENST00000408483 83 ntBASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 HMGA1P5-201ENST00000412453 271 ntBASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 RN7SL275P-201ENST00000582762 335 ntBASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 AC010654.1-201ENST00000615722 808 ntBASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 AC079776.2-201ENST00000641154 1609 ntBASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H2AFB1P0C5Y9 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 AGAP7P-201ENST00000582299 2062 ntBASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 AGAP14-201ENST00000624701 2060 ntBASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 AC012618.2-201ENST00000428058 849 ntBASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 AC005786.4-201ENST00000623369 682 ntBASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
H2AFB1P0C5Y9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2AFB1P0C5Y9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2AFB1P0C5Y9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H2AFB1P0C5Y9 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2AFB1P0C5Y9 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.96□□□□□ -0.33
H2AFB1P0C5Y9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2AFB1P0C5Y9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H2AFB1P0C5Y9 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2AFB1P0C5Y9 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2AFB1P0C5Y9 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2AFB1P0C5Y9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
H2AFB1P0C5Y9 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.96□□□□□ -0.33
H2AFB1P0C5Y9 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms