Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.78■□□□□ 0.28
ERBB2P04626 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ERBB2P04626 AL596257.1-201ENST00000641463 2694 ntBASIC16.78■□□□□ 0.28
ERBB2P04626 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ERBB2P04626 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ERBB2P04626 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ERBB2P04626 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ERBB2P04626 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ERBB2P04626 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERBB2P04626 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.77■□□□□ 0.28
ERBB2P04626 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ERBB2P04626 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.77■□□□□ 0.28
ERBB2P04626 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ERBB2P04626 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.77■□□□□ 0.28
ERBB2P04626 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.77■□□□□ 0.28
ERBB2P04626 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERBB2P04626 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERBB2P04626 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.77■□□□□ 0.28
ERBB2P04626 AC092580.3-201ENST00000430932 139 ntBASIC16.77■□□□□ 0.28
ERBB2P04626 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.77■□□□□ 0.28
ERBB2P04626 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.77■□□□□ 0.28
ERBB2P04626 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.77■□□□□ 0.28
ERBB2P04626 HLA-V-204ENST00000476601 1289 ntBASIC16.77■□□□□ 0.28
ERBB2P04626 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.77■□□□□ 0.28
ERBB2P04626 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.77■□□□□ 0.28
ERBB2P04626 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.77■□□□□ 0.28
ERBB2P04626 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERBB2P04626 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
ERBB2P04626 AC140878.1-201ENST00000565277 250 ntBASIC16.77■□□□□ 0.28
ERBB2P04626 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.77■□□□□ 0.28
ERBB2P04626 TEX28P1-201ENST00000613479 1221 ntBASIC16.77■□□□□ 0.28
ERBB2P04626 TEX28P2-201ENST00000617764 1221 ntBASIC16.77■□□□□ 0.28
ERBB2P04626 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ERBB2P04626 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERBB2P04626 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERBB2P04626 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERBB2P04626 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.77■□□□□ 0.28
ERBB2P04626 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.77■□□□□ 0.28
ERBB2P04626 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
ERBB2P04626 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
ERBB2P04626 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.77■□□□□ 0.27
ERBB2P04626 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.77■□□□□ 0.27
ERBB2P04626 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ERBB2P04626 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.77■□□□□ 0.27
ERBB2P04626 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ERBB2P04626 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.77■□□□□ 0.27
ERBB2P04626 FO538757.1-201ENST00000623083 1397 ntBASIC16.77■□□□□ 0.27
ERBB2P04626 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ERBB2P04626 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ERBB2P04626 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.76■□□□□ 0.27
ERBB2P04626 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ERBB2P04626 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ERBB2P04626 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ERBB2P04626 AC092127.1-201ENST00000567093 3455 ntBASIC16.76■□□□□ 0.27
ERBB2P04626 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ERBB2P04626 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
ERBB2P04626 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ERBB2P04626 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.76■□□□□ 0.27
ERBB2P04626 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.76■□□□□ 0.27
ERBB2P04626 TREML5P-201ENST00000421694 576 ntBASIC16.76■□□□□ 0.27
ERBB2P04626 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.76■□□□□ 0.27
ERBB2P04626 AC069120.2-201ENST00000524091 540 ntBASIC16.76■□□□□ 0.27
ERBB2P04626 DUX4L27-201ENST00000554796 1261 ntBASIC16.76■□□□□ 0.27
ERBB2P04626 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ERBB2P04626 AC073592.8-201ENST00000624126 511 ntBASIC16.76■□□□□ 0.27
ERBB2P04626 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
ERBB2P04626 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ERBB2P04626 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.76■□□□□ 0.27
ERBB2P04626 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
ERBB2P04626 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
ERBB2P04626 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ERBB2P04626 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ERBB2P04626 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.75■□□□□ 0.27
ERBB2P04626 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms