Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HCN1O60741 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.04■□□□□ -0
HCN1O60741 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 AC020765.3-201ENST00000613051 740 ntBASIC15.04■□□□□ -0
HCN1O60741 AL136317.3-201ENST00000618497 906 ntBASIC15.04■□□□□ -0
HCN1O60741 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.04■□□□□ -0
HCN1O60741 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 DBET-201ENST00000630918 3363 ntBASIC15.04■□□□□ -0
HCN1O60741 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HCN1O60741 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HCN1O60741 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.04■□□□□ -0
HCN1O60741 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.04■□□□□ -0
HCN1O60741 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HCN1O60741 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.04■□□□□ -0
HCN1O60741 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HCN1O60741 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HCN1O60741 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.03■□□□□ -0
HCN1O60741 AC016027.1-202ENST00000607927 1699 ntBASIC15.03■□□□□ -0
HCN1O60741 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HCN1O60741 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
HCN1O60741 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
HCN1O60741 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.03■□□□□ -0
HCN1O60741 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HCN1O60741 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.03■□□□□ -0
HCN1O60741 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.03■□□□□ -0
HCN1O60741 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HCN1O60741 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.03■□□□□ -0
HCN1O60741 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.03■□□□□ -0
HCN1O60741 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HCN1O60741 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.03■□□□□ -0
HCN1O60741 KRT18P34-201ENST00000488218 1270 ntBASIC15.03■□□□□ -0
HCN1O60741 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.03■□□□□ -0
HCN1O60741 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.03■□□□□ -0
HCN1O60741 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.03■□□□□ -0
HCN1O60741 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.03■□□□□ -0
HCN1O60741 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.03■□□□□ -0
HCN1O60741 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.03■□□□□ -0
HCN1O60741 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.03■□□□□ -0
HCN1O60741 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
HCN1O60741 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.03■□□□□ -0
HCN1O60741 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HCN1O60741 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
HCN1O60741 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.03■□□□□ -0
HCN1O60741 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HCN1O60741 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.03■□□□□ -0
HCN1O60741 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.03■□□□□ -0
HCN1O60741 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HCN1O60741 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.03■□□□□ -0
HCN1O60741 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.03■□□□□ -0
HCN1O60741 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.02■□□□□ -0
HCN1O60741 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HCN1O60741 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
HCN1O60741 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HCN1O60741 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HCN1O60741 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.02■□□□□ -0
HCN1O60741 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.02■□□□□ -0
HCN1O60741 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
HCN1O60741 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HCN1O60741 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
HCN1O60741 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.02■□□□□ -0
HCN1O60741 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HCN1O60741 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HCN1O60741 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HCN1O60741 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HCN1O60741 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms