Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TSPAN4O14817 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.57□□□□□ -0.24
TSPAN4O14817 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TSPAN4O14817 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
TSPAN4O14817 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TSPAN4O14817 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TSPAN4O14817 LINC01230-201ENST00000625222 3017 ntBASIC13.57□□□□□ -0.24
TSPAN4O14817 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TSPAN4O14817 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TSPAN4O14817 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TSPAN4O14817 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.57□□□□□ -0.24
TSPAN4O14817 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TSPAN4O14817 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TSPAN4O14817 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
TSPAN4O14817 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TSPAN4O14817 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TSPAN4O14817 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
TSPAN4O14817 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.56□□□□□ -0.24
TSPAN4O14817 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TSPAN4O14817 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TSPAN4O14817 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TSPAN4O14817 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.56□□□□□ -0.24
TSPAN4O14817 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 TSSC2-201ENST00000450217 709 ntBASIC13.56□□□□□ -0.24
TSPAN4O14817 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.56□□□□□ -0.24
TSPAN4O14817 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 IGHV3-41-201ENST00000613121 348 ntBASIC13.56□□□□□ -0.24
TSPAN4O14817 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.56□□□□□ -0.24
TSPAN4O14817 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.56□□□□□ -0.24
TSPAN4O14817 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.56□□□□□ -0.24
TSPAN4O14817 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.56□□□□□ -0.24
TSPAN4O14817 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
TSPAN4O14817 AL596087.1-201ENST00000400979 1969 ntBASIC13.56□□□□□ -0.24
TSPAN4O14817 AC132938.6-201ENST00000623828 1655 ntBASIC13.56□□□□□ -0.24
TSPAN4O14817 AC016734.2-201ENST00000624325 1377 ntBASIC13.56□□□□□ -0.24
TSPAN4O14817 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
TSPAN4O14817 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.56□□□□□ -0.24
TSPAN4O14817 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TSPAN4O14817 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TSPAN4O14817 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TSPAN4O14817 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
TSPAN4O14817 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.55□□□□□ -0.24
TSPAN4O14817 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TSPAN4O14817 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 BEND3P1-201ENST00000421591 1944 ntBASIC13.55□□□□□ -0.24
TSPAN4O14817 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.55□□□□□ -0.24
TSPAN4O14817 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.55□□□□□ -0.24
TSPAN4O14817 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.55□□□□□ -0.24
TSPAN4O14817 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TSPAN4O14817 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.55□□□□□ -0.24
TSPAN4O14817 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
TSPAN4O14817 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.55□□□□□ -0.24
TSPAN4O14817 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.55□□□□□ -0.24
TSPAN4O14817 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TSPAN4O14817 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 AL109954.1-202ENST00000564051 2148 ntBASIC13.55□□□□□ -0.24
TSPAN4O14817 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.55□□□□□ -0.24
TSPAN4O14817 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TSPAN4O14817 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TSPAN4O14817 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms