Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 BX276092.7-203ENST00000637198 1536 ntBASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 PER1-211ENST00000581082 4521 ntTSL 5 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 SCN5A-208ENST00000450102 6284 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 AC022497.1-201ENST00000624916 3691 ntBASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 SLC25A25-AS1-201ENST00000418747 6391 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 CYP2T1P-201ENST00000432607 1285 ntBASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 AL603832.2-201ENST00000566195 2125 ntBASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 AC068338.2-201ENST00000563278 1430 ntBASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 C2CD2-201ENST00000329623 5844 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 AMT-221ENST00000538581 2038 ntTSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 SLIT2-212ENST00000622093 6380 ntTSL 5 BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 FER1L5-205ENST00000623246 6513 ntTSL 5 BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 CACNA1C-203ENST00000344100 6634 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC8.84□□□□□ -0.99
CHKB-CPT1BH3BT56 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms