RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
SCN5A-208ENST00000450102 PELP1Q8IZL8 1130 aaKnown RBP17.58■□□□□ 0.4
SCN5A-208ENST00000450102 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
SCN5A-208ENST00000450102 EHMT2Q96KQ7 1210 aa17.32■□□□□ 0.36
SCN5A-208ENST00000450102 APLP2Q06481 763 aa17.1■□□□□ 0.33
SCN5A-208ENST00000450102 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
SCN5A-208ENST00000450102 ERICH6Q7L0X2 663 aa16.98■□□□□ 0.31
SCN5A-208ENST00000450102 CCER1Q8TC90 406 aaPredicted RBP16.81■□□□□ 0.28
SCN5A-208ENST00000450102 SHROOM4Q9ULL8 1493 aa16.8■□□□□ 0.28
SCN5A-208ENST00000450102 TTBK1Q5TCY1 1321 aaPredicted RBP16.74■□□□□ 0.27
SCN5A-208ENST00000450102 ATP1B4Q9UN42 357 aaPredicted RBP16.55■□□□□ 0.24
SCN5A-208ENST00000450102 RANGAP1P46060 587 aaPredicted RBP16.55■□□□□ 0.24
SCN5A-208ENST00000450102 PCGF6Q9BYE7 350 aa16.5■□□□□ 0.23
SCN5A-208ENST00000450102 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
SCN5A-208ENST00000450102 NEFLP07196 543 aa16.4■□□□□ 0.22
SCN5A-208ENST00000450102 MYT1Q01538 1121 aa16.26■□□□□ 0.19
SCN5A-208ENST00000450102 DAXXQ9UER7 740 aaPredicted RBP16.21■□□□□ 0.19
SCN5A-208ENST00000450102 YTHDC1Q96MU7 727 aaKnown RBP16.18■□□□□ 0.18
SCN5A-208ENST00000450102 MYT1LQ9UL68 1186 aa16.16■□□□□ 0.18
SCN5A-208ENST00000450102 ZEB1P37275 1124 aaPredicted RBP16.15■□□□□ 0.18
SCN5A-208ENST00000450102 NISCHQ9Y2I1 1504 aa16.09■□□□□ 0.17
SCN5A-208ENST00000450102 UBTFP17480 764 aaKnown RBP16.09■□□□□ 0.17
SCN5A-208ENST00000450102 POLR3GLQ9BT43 218 aa16.04■□□□□ 0.16
SCN5A-208ENST00000450102 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
SCN5A-208ENST00000450102 CHIC1Q5VXU3 224 aa15.92■□□□□ 0.14
SCN5A-208ENST00000450102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
SCN5A-208ENST00000450102 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
SCN5A-208ENST00000450102 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
SCN5A-208ENST00000450102 CNGB1Q14028 1251 aaPredicted RBP15.87■□□□□ 0.13
SCN5A-208ENST00000450102 ITGAEP38570 1179 aa15.77■□□□□ 0.11
SCN5A-208ENST00000450102 ZNF316A6NFI3 1004 aaPredicted RBP15.76■□□□□ 0.11
SCN5A-208ENST00000450102 CLSPNQ9HAW4 1339 aa15.76■□□□□ 0.11
SCN5A-208ENST00000450102 PPARGC1BQ86YN6 1023 aaKnown RBP15.76■□□□□ 0.11
SCN5A-208ENST00000450102 RTL5Q5HYW3 569 aaPredicted RBP15.65■□□□□ 0.1
SCN5A-208ENST00000450102 ZBTB47Q9UFB7 747 aaPredicted RBP15.5■□□□□ 0.07
SCN5A-208ENST00000450102 SLC24A1O60721 1099 aa15.47■□□□□ 0.07
SCN5A-208ENST00000450102 BCL11AQ9H165 835 aa15.41■□□□□ 0.06
SCN5A-208ENST00000450102 TRIM26Q12899 539 aaPredicted RBP15.39■□□□□ 0.05
SCN5A-208ENST00000450102 HRCP23327 699 aa15.31■□□□□ 0.04
SCN5A-208ENST00000450102 TRIM52Q96A61 297 aa15.3■□□□□ 0.04
SCN5A-208ENST00000450102 BCANQ96GW7 911 aa15.27■□□□□ 0.03
SCN5A-208ENST00000450102 CANXP27824 592 aaKnown RBP15.25■□□□□ 0.03
SCN5A-208ENST00000450102 FAM50AQ14320 339 aaKnown RBP15.24■□□□□ 0.03
SCN5A-208ENST00000450102 NEFMP07197 916 aa15.21■□□□□ 0.03
SCN5A-208ENST00000450102 ZNF326Q5BKZ1 582 aaKnown RBP15.2■□□□□ 0.02
SCN5A-208ENST00000450102 NEUROD1Q13562 356 aa15.16■□□□□ 0.02
SCN5A-208ENST00000450102 CDK11AQ9UQ88 783 aaPredicted RBP15.12■□□□□ 0.01
SCN5A-208ENST00000450102 DIEXFQ68CQ4 756 aaKnown RBP15.09■□□□□ 0.01
SCN5A-208ENST00000450102 ANP32CO43423 234 aa15.06■□□□□ 0
SCN5A-208ENST00000450102 LOC105371045A0A1W2PR82 267 aa15.03■□□□□ -0
SCN5A-208ENST00000450102 ANP32BQ92688 251 aaKnown RBP15.01□□□□□ -0.01
SCN5A-208ENST00000450102 FBLN2P98095 1184 aa15□□□□□ -0.01
SCN5A-208ENST00000450102 HSP90AA1P07900 732 aaKnown RBP14.96□□□□□ -0.01
SCN5A-208ENST00000450102 ESF1Q9H501 851 aaKnown RBP14.94□□□□□ -0.02
SCN5A-208ENST00000450102 NPM2Q86SE8 214 aaKnown RBP14.94□□□□□ -0.02
SCN5A-208ENST00000450102 ANP32AP39687 249 aaKnown RBP14.93□□□□□ -0.02
SCN5A-208ENST00000450102 PLPPR3Q6T4P5 718 aa14.92□□□□□ -0.02
SCN5A-208ENST00000450102 EIF5BO60841 1220 aaKnown RBP14.9□□□□□ -0.02
SCN5A-208ENST00000450102 CDK11BP21127 795 aaKnown RBP14.88□□□□□ -0.03
SCN5A-208ENST00000450102 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
SCN5A-208ENST00000450102 GTF3C3Q9Y5Q9 886 aa14.81□□□□□ -0.04
SCN5A-208ENST00000450102 UPF2Q9HAU5 1272 aaKnown RBP14.8□□□□□ -0.04
SCN5A-208ENST00000450102 ARID3CA6NKF2 412 aa14.79□□□□□ -0.04
SCN5A-208ENST00000450102 CHGAP10645 457 aaKnown RBP14.79□□□□□ -0.04
SCN5A-208ENST00000450102 A0A0G2JS52 829 aa14.79□□□□□ -0.04
SCN5A-208ENST00000450102 ZNF777Q9ULD5 760 aaPredicted RBP14.77□□□□□ -0.05
SCN5A-208ENST00000450102 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
SCN5A-208ENST00000450102 GLIPR1L2Q4G1C9 344 aa14.71□□□□□ -0.06
SCN5A-208ENST00000450102 ARXQ96QS3 562 aa14.67□□□□□ -0.06
SCN5A-208ENST00000450102 P3H3Q8IVL6 736 aa14.66□□□□□ -0.06
SCN5A-208ENST00000450102 SALL2Q9Y467 1007 aaPredicted RBP14.62□□□□□ -0.07
SCN5A-208ENST00000450102 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
SCN5A-208ENST00000450102 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.59□□□□□ -0.07
SCN5A-208ENST00000450102 TULP1O00294 542 aaPredicted RBP14.59□□□□□ -0.07
SCN5A-208ENST00000450102 ZBTB7CA1YPR0 619 aa14.59□□□□□ -0.07
SCN5A-208ENST00000450102 PLEKHG5O94827 1062 aa14.58□□□□□ -0.08
SCN5A-208ENST00000450102 NPM1P06748 294 aaKnown RBP eCLIP14.58□□□□□ -0.08
SCN5A-208ENST00000450102 MYH16Q9H6N6 1097 aa14.54□□□□□ -0.08
SCN5A-208ENST00000450102 FAM9BQ8IZU0 186 aa14.54□□□□□ -0.08
SCN5A-208ENST00000450102 FKBP8Q14318 412 aa14.54□□□□□ -0.08
SCN5A-208ENST00000450102 C14orf37Q86TY3 774 aa14.51□□□□□ -0.09
SCN5A-208ENST00000450102 HNRNPUQ00839 825 aaKnown RBP eCLIP14.5□□□□□ -0.09
SCN5A-208ENST00000450102 NBR1Q14596 966 aa14.5□□□□□ -0.09
SCN5A-208ENST00000450102 WDR43Q15061 677 aaKnown RBP eCLIP14.5□□□□□ -0.09
SCN5A-208ENST00000450102 NCLP19338 710 aaKnown RBP14.49□□□□□ -0.09
SCN5A-208ENST00000450102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.48□□□□□ -0.09
SCN5A-208ENST00000450102 CCDC136Q96JN2 1154 aa14.47□□□□□ -0.09
SCN5A-208ENST00000450102 TMC1Q8TDI8 760 aa14.46□□□□□ -0.09
SCN5A-208ENST00000450102 TONSLQ96HA7 1378 aa14.45□□□□□ -0.1
SCN5A-208ENST00000450102 HAP1P54257 671 aaPredicted RBP14.45□□□□□ -0.1
SCN5A-208ENST00000450102 ZRSR1Q15695 479 aaKnown RBP14.44□□□□□ -0.1
SCN5A-208ENST00000450102 SENP3Q9H4L4 574 aaPredicted RBP14.4□□□□□ -0.1
SCN5A-208ENST00000450102 TRIM44Q96DX7 344 aaPredicted RBP14.39□□□□□ -0.11
SCN5A-208ENST00000450102 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
SCN5A-208ENST00000450102 ACIN1Q9UKV3 1341 aaKnown RBP14.39□□□□□ -0.11
SCN5A-208ENST00000450102 TPRNQ4KMQ1 711 aa14.37□□□□□ -0.11
SCN5A-208ENST00000450102 KDM2AQ9Y2K7 1162 aa14.36□□□□□ -0.11
SCN5A-208ENST00000450102 NPHP1O15259 732 aa14.35□□□□□ -0.11
SCN5A-208ENST00000450102 DDX10Q13206 875 aaKnown RBP14.35□□□□□ -0.11
SCN5A-208ENST00000450102 PTMAP06454 111 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 854.4 ms