Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 AC007541.1-201ENST00000570282 1469 ntBASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 MEIS3P1-201ENST00000495167 958 ntBASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 AC055876.2-201ENST00000531834 546 ntBASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 AL596257.1-201ENST00000641463 2694 ntBASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 AC006449.5-201ENST00000610658 2098 ntBASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CDK5RAP1Q96SZ6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 TPRX2P-201ENST00000535362 881 ntBASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 RRP7BP-205ENST00000566851 833 ntBASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 AC099568.2-201ENST00000609194 695 ntBASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK5RAP1Q96SZ6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 AC092364.2-201ENST00000596710 2692 ntBASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK5RAP1Q96SZ6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms