Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.7■□□□□ 0.1
ATL1Q8WXF7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 AC067930.6-201ENST00000623257 4947 ntBASIC15.69■□□□□ 0.1
ATL1Q8WXF7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 AP3S2-216ENST00000617003 1561 ntBASIC15.69■□□□□ 0.1
ATL1Q8WXF7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
ATL1Q8WXF7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 AC004461.1-201ENST00000412461 403 ntBASIC15.68■□□□□ 0.1
ATL1Q8WXF7 AL627223.1-201ENST00000416693 442 ntBASIC15.68■□□□□ 0.1
ATL1Q8WXF7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 AL139010.1-201ENST00000454878 894 ntBASIC15.68■□□□□ 0.1
ATL1Q8WXF7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 RARRES2P9-201ENST00000565168 469 ntBASIC15.68■□□□□ 0.1
ATL1Q8WXF7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 AL691432.1-201ENST00000596308 1422 ntBASIC15.68■□□□□ 0.1
ATL1Q8WXF7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATL1Q8WXF7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms