Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 HCG4B-203ENST00000450128 991 ntBASIC14.33□□□□□ -0.12
LRRC28Q86X40 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 TOP3BP1-201ENST00000420768 1380 ntBASIC14.33□□□□□ -0.12
LRRC28Q86X40 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRC28Q86X40 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LRRC28Q86X40 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 AC040169.1-201ENST00000565382 521 ntBASIC14.32□□□□□ -0.12
LRRC28Q86X40 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 AC026748.1-201ENST00000624349 3251 ntBASIC14.32□□□□□ -0.12
LRRC28Q86X40 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 SNX18-202ENST00000343017 3140 ntBASIC14.32□□□□□ -0.12
LRRC28Q86X40 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRRC28Q86X40 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRC28Q86X40 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRC28Q86X40 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRC28Q86X40 KRT18P2-201ENST00000447938 1258 ntBASIC14.31□□□□□ -0.12
LRRC28Q86X40 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms