Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
NKX2-5P52952 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-5P52952 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-5P52952 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NKX2-5P52952 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NKX2-5P52952 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NKX2-5P52952 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.64□□□□□ -0.23
NKX2-5P52952 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-5P52952 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.64□□□□□ -0.23
NKX2-5P52952 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NKX2-5P52952 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 LINC01144-201ENST00000626198 1710 ntBASIC13.64□□□□□ -0.23
NKX2-5P52952 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-5P52952 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 MTHFR-210ENST00000641407 2387 ntBASIC13.64□□□□□ -0.23
NKX2-5P52952 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-5P52952 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NKX2-5P52952 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX2-5P52952 AP001267.2-201ENST00000532619 2086 ntBASIC13.63□□□□□ -0.23
NKX2-5P52952 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NKX2-5P52952 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX2-5P52952 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX2-5P52952 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX2-5P52952 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX2-5P52952 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX2-5P52952 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX2-5P52952 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NKX2-5P52952 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX2-5P52952 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX2-5P52952 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX2-5P52952 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NKX2-5P52952 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 AC004911.1-201ENST00000416316 871 ntBASIC13.63□□□□□ -0.23
NKX2-5P52952 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 KRT16P5-201ENST00000455284 522 ntBASIC13.63□□□□□ -0.23
NKX2-5P52952 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX2-5P52952 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NKX2-5P52952 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX2-5P52952 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.63□□□□□ -0.23
NKX2-5P52952 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX2-5P52952 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
NKX2-5P52952 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
NKX2-5P52952 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NKX2-5P52952 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NKX2-5P52952 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NKX2-5P52952 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
NKX2-5P52952 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NKX2-5P52952 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX2-5P52952 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NKX2-5P52952 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX2-5P52952 AC132938.5-201ENST00000624980 1813 ntBASIC13.62□□□□□ -0.23
NKX2-5P52952 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms