Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.48□□□□□ -0.09
APOBEC1P41238 AL450472.2-201ENST00000603663 1156 ntBASIC14.48□□□□□ -0.09
APOBEC1P41238 AL133215.2-201ENST00000609242 977 ntBASIC14.48□□□□□ -0.09
APOBEC1P41238 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.48□□□□□ -0.09
APOBEC1P41238 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.48□□□□□ -0.09
APOBEC1P41238 Z92544.3-201ENST00000624747 417 ntBASIC14.48□□□□□ -0.09
APOBEC1P41238 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.48□□□□□ -0.09
APOBEC1P41238 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
APOBEC1P41238 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
APOBEC1P41238 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.48□□□□□ -0.09
APOBEC1P41238 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.48□□□□□ -0.09
APOBEC1P41238 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
APOBEC1P41238 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.48□□□□□ -0.09
APOBEC1P41238 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOBEC1P41238 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
APOBEC1P41238 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 CETN4P-206ENST00000642099 2168 ntBASIC14.47□□□□□ -0.09
APOBEC1P41238 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 KRT18P28-201ENST00000453838 1332 ntBASIC14.47□□□□□ -0.09
APOBEC1P41238 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.47□□□□□ -0.09
APOBEC1P41238 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.47□□□□□ -0.09
APOBEC1P41238 AC007950.2-201ENST00000615045 2347 ntBASIC14.47□□□□□ -0.09
APOBEC1P41238 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
APOBEC1P41238 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
APOBEC1P41238 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
APOBEC1P41238 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
APOBEC1P41238 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
APOBEC1P41238 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.47□□□□□ -0.09
APOBEC1P41238 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
APOBEC1P41238 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 PHKG1P2-201ENST00000457537 863 ntBASIC14.47□□□□□ -0.09
APOBEC1P41238 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.47□□□□□ -0.09
APOBEC1P41238 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.47□□□□□ -0.09
APOBEC1P41238 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.47□□□□□ -0.09
APOBEC1P41238 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
APOBEC1P41238 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
APOBEC1P41238 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.47□□□□□ -0.09
APOBEC1P41238 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.47□□□□□ -0.09
APOBEC1P41238 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
APOBEC1P41238 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
APOBEC1P41238 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 KRT8P12-202ENST00000472924 1397 ntBASIC14.47□□□□□ -0.09
APOBEC1P41238 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOBEC1P41238 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.46□□□□□ -0.09
APOBEC1P41238 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
APOBEC1P41238 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
APOBEC1P41238 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.46□□□□□ -0.09
APOBEC1P41238 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
APOBEC1P41238 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
APOBEC1P41238 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.46□□□□□ -0.09
APOBEC1P41238 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
APOBEC1P41238 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOBEC1P41238 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
APOBEC1P41238 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.46□□□□□ -0.09
APOBEC1P41238 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.46□□□□□ -0.09
APOBEC1P41238 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
APOBEC1P41238 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOBEC1P41238 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
APOBEC1P41238 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.46□□□□□ -0.09
APOBEC1P41238 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.46□□□□□ -0.09
APOBEC1P41238 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms