Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 FAM86GP-201ENST00000448322 971 ntBASIC14.14□□□□□ -0.15
THBS4P35443 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.14□□□□□ -0.15
THBS4P35443 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
THBS4P35443 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.14□□□□□ -0.15
THBS4P35443 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 AL512356.2-201ENST00000546955 174 ntBASIC14.14□□□□□ -0.15
THBS4P35443 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.14□□□□□ -0.15
THBS4P35443 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.14□□□□□ -0.15
THBS4P35443 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.14□□□□□ -0.15
THBS4P35443 AL355385.1-201ENST00000606123 409 ntBASIC14.14□□□□□ -0.15
THBS4P35443 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.14□□□□□ -0.15
THBS4P35443 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.14□□□□□ -0.15
THBS4P35443 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
THBS4P35443 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.14□□□□□ -0.15
THBS4P35443 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.14□□□□□ -0.15
THBS4P35443 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.14□□□□□ -0.15
THBS4P35443 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
THBS4P35443 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.14□□□□□ -0.15
THBS4P35443 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
THBS4P35443 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS4P35443 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS4P35443 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS4P35443 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.13□□□□□ -0.15
THBS4P35443 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS4P35443 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS4P35443 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS4P35443 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.13□□□□□ -0.15
THBS4P35443 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.13□□□□□ -0.15
THBS4P35443 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.13□□□□□ -0.15
THBS4P35443 CNN2P2-201ENST00000443536 909 ntBASIC14.13□□□□□ -0.15
THBS4P35443 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.13□□□□□ -0.15
THBS4P35443 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.13□□□□□ -0.15
THBS4P35443 CNN2P3-201ENST00000450201 906 ntBASIC14.13□□□□□ -0.15
THBS4P35443 AC069262.1-201ENST00000539058 672 ntBASIC14.13□□□□□ -0.15
THBS4P35443 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.13□□□□□ -0.15
THBS4P35443 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
THBS4P35443 SPTSSB-204ENST00000617024 1292 ntBASIC14.13□□□□□ -0.15
THBS4P35443 AL136317.3-201ENST00000618497 906 ntBASIC14.13□□□□□ -0.15
THBS4P35443 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.13□□□□□ -0.15
THBS4P35443 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS4P35443 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.13□□□□□ -0.15
THBS4P35443 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
THBS4P35443 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS4P35443 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.13□□□□□ -0.15
THBS4P35443 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS4P35443 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS4P35443 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS4P35443 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
THBS4P35443 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS4P35443 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
THBS4P35443 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.12□□□□□ -0.15
THBS4P35443 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.12□□□□□ -0.15
THBS4P35443 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS4P35443 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
THBS4P35443 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
THBS4P35443 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
THBS4P35443 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
THBS4P35443 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.12□□□□□ -0.15
THBS4P35443 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS4P35443 FOXO1B-201ENST00000504678 1527 ntBASIC14.12□□□□□ -0.15
THBS4P35443 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS4P35443 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS4P35443 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
THBS4P35443 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS4P35443 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms