Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.85□□□□□ -0.51
CKS2P33552 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.85□□□□□ -0.51
CKS2P33552 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.85□□□□□ -0.51
CKS2P33552 CYP2A7P1-201ENST00000595391 815 ntBASIC11.85□□□□□ -0.51
CKS2P33552 AP001350.2-201ENST00000625104 1094 ntBASIC11.85□□□□□ -0.51
CKS2P33552 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CKS2P33552 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.85□□□□□ -0.51
CKS2P33552 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.85□□□□□ -0.51
CKS2P33552 AC131212.3-201ENST00000624087 4219 ntBASIC11.85□□□□□ -0.51
CKS2P33552 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.85□□□□□ -0.51
CKS2P33552 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.85□□□□□ -0.51
CKS2P33552 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 AC232323.1-201ENST00000540724 2099 ntBASIC11.85□□□□□ -0.51
CKS2P33552 REXO1L5P-201ENST00000622260 2098 ntBASIC11.85□□□□□ -0.51
CKS2P33552 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.85□□□□□ -0.51
CKS2P33552 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CKS2P33552 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CKS2P33552 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CKS2P33552 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.84□□□□□ -0.51
CKS2P33552 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CKS2P33552 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
CKS2P33552 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.84□□□□□ -0.51
CKS2P33552 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC11.84□□□□□ -0.51
CKS2P33552 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.84□□□□□ -0.51
CKS2P33552 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.84□□□□□ -0.51
CKS2P33552 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.84□□□□□ -0.51
CKS2P33552 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CKS2P33552 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.84□□□□□ -0.51
CKS2P33552 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.84□□□□□ -0.51
CKS2P33552 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CKS2P33552 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CKS2P33552 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CKS2P33552 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CKS2P33552 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CKS2P33552 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CKS2P33552 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CKS2P33552 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.83□□□□□ -0.52
CKS2P33552 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.83□□□□□ -0.52
CKS2P33552 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.83□□□□□ -0.52
CKS2P33552 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.83□□□□□ -0.52
CKS2P33552 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CKS2P33552 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.83□□□□□ -0.52
CKS2P33552 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CKS2P33552 AC013726.1-201ENST00000563747 2285 ntBASIC11.83□□□□□ -0.52
CKS2P33552 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms