Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA4P12838 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA4P12838 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.12□□□□□ -0.31
DEFA4P12838 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA4P12838 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
DEFA4P12838 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA4P12838 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA4P12838 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA4P12838 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA4P12838 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA4P12838 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA4P12838 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA4P12838 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA4P12838 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
DEFA4P12838 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA4P12838 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DEFA4P12838 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
DEFA4P12838 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.11□□□□□ -0.31
DEFA4P12838 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.11□□□□□ -0.31
DEFA4P12838 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
DEFA4P12838 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.11□□□□□ -0.31
DEFA4P12838 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA4P12838 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
DEFA4P12838 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA4P12838 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
DEFA4P12838 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.11□□□□□ -0.31
DEFA4P12838 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.11□□□□□ -0.31
DEFA4P12838 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA4P12838 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
DEFA4P12838 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 AC098831.1-202ENST00000438821 336 ntBASIC13.11□□□□□ -0.31
DEFA4P12838 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
DEFA4P12838 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA4P12838 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA4P12838 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA4P12838 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
DEFA4P12838 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.11□□□□□ -0.31
DEFA4P12838 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
DEFA4P12838 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
DEFA4P12838 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
DEFA4P12838 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 SNX33P1-201ENST00000592116 1762 ntBASIC13.11□□□□□ -0.31
DEFA4P12838 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
DEFA4P12838 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.11□□□□□ -0.31
DEFA4P12838 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.11□□□□□ -0.31
DEFA4P12838 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DEFA4P12838 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
DEFA4P12838 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.1□□□□□ -0.31
DEFA4P12838 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
DEFA4P12838 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.1□□□□□ -0.31
DEFA4P12838 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
DEFA4P12838 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.1□□□□□ -0.31
DEFA4P12838 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.1□□□□□ -0.31
DEFA4P12838 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.1□□□□□ -0.31
DEFA4P12838 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.1□□□□□ -0.31
DEFA4P12838 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.1□□□□□ -0.31
DEFA4P12838 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
DEFA4P12838 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.1□□□□□ -0.31
DEFA4P12838 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 MIR4515-201ENST00000584082 81 ntBASIC13.1□□□□□ -0.31
DEFA4P12838 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.1□□□□□ -0.31
DEFA4P12838 AC116407.3-201ENST00000623905 1129 ntBASIC13.1□□□□□ -0.31
DEFA4P12838 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DEFA4P12838 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms