Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.14■□□□□ 0.17
RETP07949 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.14■□□□□ 0.17
RETP07949 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.14■□□□□ 0.17
RETP07949 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.14■□□□□ 0.17
RETP07949 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 USP32P1-208ENST00000506594 1164 ntBASIC16.14■□□□□ 0.17
RETP07949 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RETP07949 AP002490.2-201ENST00000524791 560 ntBASIC16.14■□□□□ 0.17
RETP07949 AC092337.1-201ENST00000568699 1129 ntBASIC16.14■□□□□ 0.17
RETP07949 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.14■□□□□ 0.17
RETP07949 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.14■□□□□ 0.17
RETP07949 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RETP07949 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RETP07949 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.14■□□□□ 0.17
RETP07949 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.14■□□□□ 0.17
RETP07949 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.14■□□□□ 0.17
RETP07949 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 AC093525.8-201ENST00000624099 1342 ntBASIC16.14■□□□□ 0.17
RETP07949 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 FRMD8P1-201ENST00000440433 1524 ntBASIC16.14■□□□□ 0.17
RETP07949 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
RETP07949 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RETP07949 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.13■□□□□ 0.17
RETP07949 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.13■□□□□ 0.17
RETP07949 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.13■□□□□ 0.17
RETP07949 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
RETP07949 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RETP07949 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RETP07949 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.13■□□□□ 0.17
RETP07949 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
RETP07949 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.13■□□□□ 0.17
RETP07949 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.13■□□□□ 0.17
RETP07949 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.13■□□□□ 0.17
RETP07949 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.13■□□□□ 0.17
RETP07949 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.13■□□□□ 0.17
RETP07949 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.13■□□□□ 0.17
RETP07949 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
RETP07949 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
RETP07949 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.13■□□□□ 0.17
RETP07949 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.13■□□□□ 0.17
RETP07949 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 PDIA3P1-201ENST00000471856 1510 ntBASIC16.13■□□□□ 0.17
RETP07949 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.13■□□□□ 0.17
RETP07949 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RETP07949 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 AC008894.3-201ENST00000624324 3103 ntBASIC16.12■□□□□ 0.17
RETP07949 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.12■□□□□ 0.17
RETP07949 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.12■□□□□ 0.17
RETP07949 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RETP07949 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.12■□□□□ 0.17
RETP07949 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RETP07949 CLK3P2-201ENST00000427566 1453 ntBASIC16.12■□□□□ 0.17
RETP07949 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.12■□□□□ 0.17
RETP07949 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RETP07949 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RETP07949 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RETP07949 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RETP07949 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.12■□□□□ 0.17
RETP07949 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RETP07949 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 FAM21FP-201ENST00000426241 1131 ntBASIC16.12■□□□□ 0.17
RETP07949 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RETP07949 TIMM17BP1-201ENST00000545713 516 ntBASIC16.12■□□□□ 0.17
RETP07949 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.12■□□□□ 0.17
RETP07949 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.12■□□□□ 0.17
RETP07949 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.12■□□□□ 0.17
RETP07949 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RETP07949 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
RETP07949 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms