Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM3P06753 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM3P06753 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TPM3P06753 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TPM3P06753 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC18.04■□□□□ 0.48
TPM3P06753 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TPM3P06753 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TPM3P06753 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
TPM3P06753 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM3P06753 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TPM3P06753 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TPM3P06753 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TPM3P06753 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.03■□□□□ 0.48
TPM3P06753 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM3P06753 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.03■□□□□ 0.48
TPM3P06753 ATP5G2P1-201ENST00000433580 426 ntBASIC18.03■□□□□ 0.48
TPM3P06753 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.03■□□□□ 0.48
TPM3P06753 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.03■□□□□ 0.48
TPM3P06753 AL160237.2-201ENST00000556165 472 ntBASIC18.03■□□□□ 0.48
TPM3P06753 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.03■□□□□ 0.48
TPM3P06753 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.03■□□□□ 0.48
TPM3P06753 AC092119.3-201ENST00000612618 583 ntBASIC18.03■□□□□ 0.48
TPM3P06753 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.03■□□□□ 0.48
TPM3P06753 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TPM3P06753 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TPM3P06753 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TPM3P06753 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM3P06753 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TPM3P06753 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TPM3P06753 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.03■□□□□ 0.48
TPM3P06753 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.03■□□□□ 0.48
TPM3P06753 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TPM3P06753 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TPM3P06753 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
TPM3P06753 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TPM3P06753 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TPM3P06753 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC18.02■□□□□ 0.48
TPM3P06753 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM3P06753 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC18.02■□□□□ 0.48
TPM3P06753 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
TPM3P06753 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TPM3P06753 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TPM3P06753 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.02■□□□□ 0.48
TPM3P06753 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
TPM3P06753 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM3P06753 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM3P06753 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM3P06753 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TPM3P06753 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM3P06753 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.02■□□□□ 0.48
TPM3P06753 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM3P06753 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
TPM3P06753 MROH4P-201ENST00000431302 1578 ntBASIC18.02■□□□□ 0.48
TPM3P06753 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM3P06753 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.02■□□□□ 0.48
TPM3P06753 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.02■□□□□ 0.48
TPM3P06753 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TPM3P06753 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.02■□□□□ 0.48
TPM3P06753 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.02■□□□□ 0.48
TPM3P06753 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.02■□□□□ 0.48
TPM3P06753 AL355877.3-201ENST00000622820 899 ntBASIC18.02■□□□□ 0.48
TPM3P06753 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.02■□□□□ 0.48
TPM3P06753 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM3P06753 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM3P06753 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM3P06753 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TPM3P06753 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
TPM3P06753 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.02■□□□□ 0.47
TPM3P06753 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.02■□□□□ 0.47
TPM3P06753 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TPM3P06753 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TPM3P06753 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.02■□□□□ 0.47
TPM3P06753 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TPM3P06753 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TPM3P06753 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TPM3P06753 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.02■□□□□ 0.47
TPM3P06753 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TPM3P06753 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TPM3P06753 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.01■□□□□ 0.47
TPM3P06753 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TPM3P06753 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.01■□□□□ 0.47
TPM3P06753 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.01■□□□□ 0.47
TPM3P06753 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms