Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
DHFRP00374 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DHFRP00374 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DHFRP00374 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DHFRP00374 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DHFRP00374 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.95□□□□□ -0.18
DHFRP00374 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
DHFRP00374 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
DHFRP00374 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DHFRP00374 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DHFRP00374 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DHFRP00374 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
DHFRP00374 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
DHFRP00374 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.94□□□□□ -0.18
DHFRP00374 AC005252.3-201ENST00000623855 2258 ntBASIC13.94□□□□□ -0.18
DHFRP00374 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.94□□□□□ -0.18
DHFRP00374 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
DHFRP00374 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.94□□□□□ -0.18
DHFRP00374 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
DHFRP00374 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.94□□□□□ -0.18
DHFRP00374 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.94□□□□□ -0.18
DHFRP00374 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.94□□□□□ -0.18
DHFRP00374 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
DHFRP00374 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.94□□□□□ -0.18
DHFRP00374 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
DHFRP00374 KRT8P26-201ENST00000534154 1276 ntBASIC13.94□□□□□ -0.18
DHFRP00374 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.94□□□□□ -0.18
DHFRP00374 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.94□□□□□ -0.18
DHFRP00374 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.94□□□□□ -0.18
DHFRP00374 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.94□□□□□ -0.18
DHFRP00374 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.94□□□□□ -0.18
DHFRP00374 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
DHFRP00374 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.94□□□□□ -0.18
DHFRP00374 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.94□□□□□ -0.18
DHFRP00374 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.94□□□□□ -0.18
DHFRP00374 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.94□□□□□ -0.18
DHFRP00374 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.94□□□□□ -0.18
DHFRP00374 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.94□□□□□ -0.18
DHFRP00374 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DHFRP00374 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
DHFRP00374 AC117489.1-201ENST00000625169 3217 ntBASIC13.94□□□□□ -0.18
DHFRP00374 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
DHFRP00374 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
DHFRP00374 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DHFRP00374 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DHFRP00374 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.93□□□□□ -0.18
DHFRP00374 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DHFRP00374 AL353593.2-201ENST00000602529 1483 ntBASIC13.93□□□□□ -0.18
DHFRP00374 AC041040.2-201ENST00000622926 2899 ntBASIC13.93□□□□□ -0.18
DHFRP00374 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
DHFRP00374 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.93□□□□□ -0.18
DHFRP00374 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DHFRP00374 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.93□□□□□ -0.18
DHFRP00374 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.93□□□□□ -0.18
DHFRP00374 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DHFRP00374 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DHFRP00374 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DHFRP00374 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.93□□□□□ -0.18
DHFRP00374 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DHFRP00374 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DHFRP00374 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DHFRP00374 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DHFRP00374 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DHFRP00374 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
DHFRP00374 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.93□□□□□ -0.18
DHFRP00374 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DHFRP00374 AC003669.1-201ENST00000334569 611 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms