Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 RNU1-129P-201ENST00000384064 167 ntBASIC13.74□□□□□ -0.21
TMEM235A6NFC5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 DUSP5P1-201ENST00000441325 1139 ntBASIC13.74□□□□□ -0.21
TMEM235A6NFC5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 SCARNA2-201ENST00000458748 420 ntBASIC13.74□□□□□ -0.21
TMEM235A6NFC5 KRT18P21-201ENST00000515767 1272 ntBASIC13.74□□□□□ -0.21
TMEM235A6NFC5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 U1.21-201ENST00000580816 167 ntBASIC13.74□□□□□ -0.21
TMEM235A6NFC5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TMEM235A6NFC5 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 C18orf15-201ENST00000623680 2534 ntBASIC13.73□□□□□ -0.21
TMEM235A6NFC5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 AC007686.3-201ENST00000619017 3487 ntBASIC13.73□□□□□ -0.21
TMEM235A6NFC5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 AC112693.3-201ENST00000624819 1983 ntBASIC13.73□□□□□ -0.21
TMEM235A6NFC5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 AL031055.1-201ENST00000606362 631 ntBASIC13.73□□□□□ -0.21
TMEM235A6NFC5 AC091076.1-201ENST00000610741 619 ntBASIC13.73□□□□□ -0.21
TMEM235A6NFC5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TMEM235A6NFC5 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms