Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 AC004987.2-201ENST00000395959 1148 ntBASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYP46A1Q9Y6A2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 ELL2P1-201ENST00000413990 1906 ntBASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 RPS8P6-201ENST00000426177 609 ntBASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 AC069335.1-201ENST00000489972 472 ntBASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 SLC25A39P2-201ENST00000537614 270 ntBASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 AC018892.3-201ENST00000623986 2499 ntBASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.02■□□□□ 0.64
CYP46A1Q9Y6A2 AL136982.4-201ENST00000437689 1740 ntBASIC19.02■□□□□ 0.63
CYP46A1Q9Y6A2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CYP46A1Q9Y6A2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.02■□□□□ 0.63
CYP46A1Q9Y6A2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CYP46A1Q9Y6A2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CYP46A1Q9Y6A2 SSR4P1-203ENST00000599569 2260 ntBASIC19.02■□□□□ 0.63
CYP46A1Q9Y6A2 AP3S2-216ENST00000617003 1561 ntBASIC19.02■□□□□ 0.63
CYP46A1Q9Y6A2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 REXO1L1P-202ENST00000608646 1974 ntBASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 AC005829.1-201ENST00000570002 483 ntBASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 PPT1-215ENST00000641471 2368 ntBASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 AC013268.4-201ENST00000637413 2228 ntBASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CYP46A1Q9Y6A2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CYP46A1Q9Y6A2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19■□□□□ 0.63
CYP46A1Q9Y6A2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19■□□□□ 0.63
CYP46A1Q9Y6A2 AC136621.1-201ENST00000624017 2304 ntBASIC19■□□□□ 0.63
CYP46A1Q9Y6A2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CYP46A1Q9Y6A2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19■□□□□ 0.63
CYP46A1Q9Y6A2 CEND1P1-201ENST00000451006 455 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms