Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 AC133561.5-201ENST00000635547 218 ntBASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 AF228730.7-201ENST00000641842 219 ntBASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 LINC00528-201ENST00000600723 2160 ntBASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 AC016734.2-201ENST00000624325 1377 ntBASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RCL1Q9Y2P8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 KRT18P1-202ENST00000452408 1331 ntBASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 DRAXINP1-201ENST00000437611 948 ntBASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 TPSP2-201ENST00000561760 610 ntBASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 C18orf15-201ENST00000623680 2534 ntBASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 AC067750.1-201ENST00000608826 6545 ntBASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 AC007191.1-201ENST00000623179 2995 ntBASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RCL1Q9Y2P8 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 AC079781.5-202ENST00000641784 3743 ntBASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RCL1Q9Y2P8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms