Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 AP001889.1-201ENST00000525414 633 ntBASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 AC068587.3-201ENST00000526613 355 ntBASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 AC000095.1-201ENST00000603208 874 ntBASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 AL607033.1-201ENST00000623900 1599 ntBASIC18.21■□□□□ 0.51
HOXC10Q9NYD6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
HOXC10Q9NYD6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 AL355864.2-201ENST00000447420 863 ntBASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 VDAC1P7-201ENST00000462417 847 ntBASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 AL583810.1-201ENST00000553344 1045 ntBASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 AP001063.1-201ENST00000568332 529 ntBASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HOXC10Q9NYD6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 AC006449.6-201ENST00000612330 2296 ntBASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 BAATP1-201ENST00000412284 1225 ntBASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 RPL7P3-201ENST00000441388 714 ntBASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 CLUHP6-201ENST00000580789 941 ntBASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXC10Q9NYD6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXC10Q9NYD6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC10Q9NYD6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HOXC10Q9NYD6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HOXC10Q9NYD6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXC10Q9NYD6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HOXC10Q9NYD6 AC022211.2-201ENST00000585075 2527 ntBASIC18.18■□□□□ 0.5
HOXC10Q9NYD6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXC10Q9NYD6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HOXC10Q9NYD6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC10Q9NYD6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC10Q9NYD6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms