Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 CSPG4P12-201ENST00000558282 4853 ntBASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42SE1Q9NRR8 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC8.09□□□□□ -1.12
CDC42SE1Q9NRR8 AC021242.3-201ENST00000607598 1377 ntBASIC8.09□□□□□ -1.12
CDC42SE1Q9NRR8 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 AC022400.8-201ENST00000623453 3599 ntBASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 FAM8A3P-201ENST00000427218 844 ntBASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 RPS2P35-201ENST00000443417 897 ntBASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 AC126564.1-201ENST00000623628 2013 ntBASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 PCDHB19P-202ENST00000625133 2914 ntBASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 AC009949.1-201ENST00000623048 1830 ntBASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42SE1Q9NRR8 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms