Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 AL590787.1-201ENST00000568856 1315 ntBASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
SMIM11BQ8TCY0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 AL845331.1-201ENST00000424978 1190 ntBASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 VENTXP5-201ENST00000523979 775 ntBASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 CD99P1-205ENST00000527459 561 ntBASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 CYP2A7P1-201ENST00000595391 815 ntBASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 ITM2C-210ENST00000620962 501 ntBASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 MME-217ENST00000616757 1315 ntTSL 5 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
SMIM11BQ8TCY0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 U82695.1-201ENST00000635752 1889 ntBASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 AL137784.3-201ENST00000623858 2288 ntBASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SMIM11BQ8TCY0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms