Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 AC011477.6-201ENST00000604980 1927 ntBASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 YBX1P5-201ENST00000509441 847 ntBASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 AC105339.1-204ENST00000636249 355 ntBASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 UXT-AS1-201ENST00000590504 1525 ntBASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 HLA-H-201ENST00000383620 1096 ntBASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 RNA5SP410-201ENST00000516285 106 ntBASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 AC055717.3-201ENST00000622967 595 ntBASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 TCAF2P1-201ENST00000291129 2421 ntBASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 AP005117.1-202ENST00000581724 1908 ntBASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TTC9CQ8N5M4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.71□□□□□ -0.37
TTC9CQ8N5M4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms