Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL54Q6P161 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.19□□□□□ -0.46
MRPL54Q6P161 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 C18orf15-201ENST00000623680 2534 ntBASIC12.18□□□□□ -0.46
MRPL54Q6P161 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 AC090616.6-203ENST00000579186 1945 ntBASIC12.18□□□□□ -0.46
MRPL54Q6P161 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 Z99916.2-201ENST00000604037 246 ntBASIC12.18□□□□□ -0.46
MRPL54Q6P161 AL138831.2-201ENST00000606564 490 ntBASIC12.18□□□□□ -0.46
MRPL54Q6P161 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 PGM5P2-202ENST00000637225 1043 ntBASIC12.18□□□□□ -0.46
MRPL54Q6P161 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL54Q6P161 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.18□□□□□ -0.46
MRPL54Q6P161 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 AC131212.3-201ENST00000624087 4219 ntBASIC12.17□□□□□ -0.46
MRPL54Q6P161 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 AL390719.2-201ENST00000606993 987 ntBASIC12.17□□□□□ -0.46
MRPL54Q6P161 AL023973.1-201ENST00000624619 620 ntBASIC12.17□□□□□ -0.46
MRPL54Q6P161 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 TOP3BP1-201ENST00000420768 1380 ntBASIC12.17□□□□□ -0.46
MRPL54Q6P161 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.17□□□□□ -0.46
MRPL54Q6P161 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL54Q6P161 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms