Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 FAM220BP-201ENST00000377689 816 ntBASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NIPAL1Q6NVV3 AC138035.3-201ENST00000622706 2791 ntBASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 AC142381.1-201ENST00000426099 345 ntBASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 AL596442.2-201ENST00000610240 980 ntBASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 AC005622.1-201ENST00000636801 1703 ntBASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NIPAL1Q6NVV3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 SPDYE7P-202ENST00000420373 878 ntBASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 RPS8P6-201ENST00000426177 609 ntBASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 AC245100.5-201ENST00000452108 331 ntBASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.52■□□□□ 0.08
NIPAL1Q6NVV3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NIPAL1Q6NVV3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms