Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.63□□□□□ -0.07
HMGA2P52926 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGA2P52926 AC098831.1-202ENST00000438821 336 ntBASIC14.63□□□□□ -0.07
HMGA2P52926 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.63□□□□□ -0.07
HMGA2P52926 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.63□□□□□ -0.07
HMGA2P52926 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
HMGA2P52926 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
HMGA2P52926 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGA2P52926 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGA2P52926 AC012313.10-201ENST00000623509 926 ntBASIC14.63□□□□□ -0.07
HMGA2P52926 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGA2P52926 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGA2P52926 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
HMGA2P52926 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGA2P52926 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HMGA2P52926 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGA2P52926 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HMGA2P52926 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGA2P52926 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGA2P52926 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGA2P52926 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGA2P52926 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGA2P52926 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGA2P52926 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HMGA2P52926 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
HMGA2P52926 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGA2P52926 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HMGA2P52926 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGA2P52926 AL390755.1-201ENST00000623716 2027 ntBASIC14.63□□□□□ -0.07
HMGA2P52926 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGA2P52926 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGA2P52926 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGA2P52926 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGA2P52926 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGA2P52926 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 AP002414.2-201ENST00000591780 3365 ntBASIC14.62□□□□□ -0.07
HMGA2P52926 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
HMGA2P52926 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
HMGA2P52926 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.62□□□□□ -0.07
HMGA2P52926 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGA2P52926 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.62□□□□□ -0.07
HMGA2P52926 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.62□□□□□ -0.07
HMGA2P52926 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HMGA2P52926 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.62□□□□□ -0.07
HMGA2P52926 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGA2P52926 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGA2P52926 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.62□□□□□ -0.07
HMGA2P52926 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HMGA2P52926 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGA2P52926 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
HMGA2P52926 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGA2P52926 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HMGA2P52926 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGA2P52926 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
HMGA2P52926 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
HMGA2P52926 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGA2P52926 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HMGA2P52926 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGA2P52926 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HMGA2P52926 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HMGA2P52926 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGA2P52926 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HMGA2P52926 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGA2P52926 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HMGA2P52926 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 AC023908.3-201ENST00000564211 3047 ntBASIC14.61□□□□□ -0.07
HMGA2P52926 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGA2P52926 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGA2P52926 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HMGA2P52926 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGA2P52926 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms