Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HCFC1P51610 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.88□□□□□ -0.19
HCFC1P51610 AC012441.1-201ENST00000446669 685 ntBASIC13.88□□□□□ -0.19
HCFC1P51610 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.88□□□□□ -0.19
HCFC1P51610 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.88□□□□□ -0.19
HCFC1P51610 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.88□□□□□ -0.19
HCFC1P51610 AC009542.2-202ENST00000619004 1067 ntBASIC13.88□□□□□ -0.19
HCFC1P51610 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.88□□□□□ -0.19
HCFC1P51610 AL133338.1-201ENST00000565695 1517 ntBASIC13.88□□□□□ -0.19
HCFC1P51610 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.88□□□□□ -0.19
HCFC1P51610 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HCFC1P51610 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCFC1P51610 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCFC1P51610 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCFC1P51610 AC093525.8-201ENST00000624099 1342 ntBASIC13.87□□□□□ -0.19
HCFC1P51610 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.87□□□□□ -0.19
HCFC1P51610 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.87□□□□□ -0.19
HCFC1P51610 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCFC1P51610 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.87□□□□□ -0.19
HCFC1P51610 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCFC1P51610 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.87□□□□□ -0.19
HCFC1P51610 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
HCFC1P51610 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.87□□□□□ -0.19
HCFC1P51610 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCFC1P51610 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCFC1P51610 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HCFC1P51610 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.87□□□□□ -0.19
HCFC1P51610 KRT18P64-201ENST00000434946 1219 ntBASIC13.87□□□□□ -0.19
HCFC1P51610 ACTBP11-201ENST00000436287 1126 ntBASIC13.87□□□□□ -0.19
HCFC1P51610 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.87□□□□□ -0.19
HCFC1P51610 FAM86LP-201ENST00000478302 853 ntBASIC13.87□□□□□ -0.19
HCFC1P51610 AC079316.1-201ENST00000548397 411 ntBASIC13.87□□□□□ -0.19
HCFC1P51610 BTNL10-201ENST00000595971 695 ntBASIC13.87□□□□□ -0.19
HCFC1P51610 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.87□□□□□ -0.19
HCFC1P51610 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.87□□□□□ -0.19
HCFC1P51610 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
HCFC1P51610 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCFC1P51610 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HCFC1P51610 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.87□□□□□ -0.19
HCFC1P51610 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.87□□□□□ -0.19
HCFC1P51610 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HCFC1P51610 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.87□□□□□ -0.19
HCFC1P51610 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HCFC1P51610 AC020907.1-201ENST00000616460 1350 ntBASIC13.87□□□□□ -0.19
HCFC1P51610 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HCFC1P51610 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HCFC1P51610 AC134915.1-201ENST00000426461 574 ntBASIC13.86□□□□□ -0.19
HCFC1P51610 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.86□□□□□ -0.19
HCFC1P51610 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.86□□□□□ -0.19
HCFC1P51610 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.86□□□□□ -0.19
HCFC1P51610 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.86□□□□□ -0.19
HCFC1P51610 AC120045.2-201ENST00000567334 178 ntBASIC13.86□□□□□ -0.19
HCFC1P51610 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.86□□□□□ -0.19
HCFC1P51610 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.86□□□□□ -0.19
HCFC1P51610 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.86□□□□□ -0.19
HCFC1P51610 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.86□□□□□ -0.19
HCFC1P51610 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.86□□□□□ -0.19
HCFC1P51610 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 AL592424.1-201ENST00000563624 1536 ntBASIC13.86□□□□□ -0.19
HCFC1P51610 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.86□□□□□ -0.19
HCFC1P51610 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.86□□□□□ -0.19
HCFC1P51610 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HCFC1P51610 AC004945.1-201ENST00000416738 983 ntBASIC13.86□□□□□ -0.19
HCFC1P51610 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.86□□□□□ -0.19
HCFC1P51610 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.86□□□□□ -0.19
HCFC1P51610 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HCFC1P51610 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.86□□□□□ -0.19
HCFC1P51610 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.86□□□□□ -0.19
HCFC1P51610 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.86□□□□□ -0.19
HCFC1P51610 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.86□□□□□ -0.19
HCFC1P51610 RHOXF1P1-202ENST00000635473 501 ntBASIC13.86□□□□□ -0.19
HCFC1P51610 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HCFC1P51610 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.86□□□□□ -0.19
HCFC1P51610 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCFC1P51610 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
HCFC1P51610 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.86□□□□□ -0.19
HCFC1P51610 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.86□□□□□ -0.19
HCFC1P51610 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms