Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SOX2P48431 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SOX2P48431 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.19□□□□□ -0.14
SOX2P48431 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.19□□□□□ -0.14
SOX2P48431 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.19□□□□□ -0.14
SOX2P48431 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
SOX2P48431 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.19□□□□□ -0.14
SOX2P48431 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.19□□□□□ -0.14
SOX2P48431 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.19□□□□□ -0.14
SOX2P48431 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.19□□□□□ -0.14
SOX2P48431 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 UPK3BP1-201ENST00000428678 509 ntBASIC14.19□□□□□ -0.14
SOX2P48431 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.19□□□□□ -0.14
SOX2P48431 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.19□□□□□ -0.14
SOX2P48431 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.19□□□□□ -0.14
SOX2P48431 MIR4515-201ENST00000584082 81 ntBASIC14.19□□□□□ -0.14
SOX2P48431 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.19□□□□□ -0.14
SOX2P48431 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.19□□□□□ -0.14
SOX2P48431 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SOX2P48431 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.19□□□□□ -0.14
SOX2P48431 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.19□□□□□ -0.14
SOX2P48431 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.19□□□□□ -0.14
SOX2P48431 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
SOX2P48431 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.19□□□□□ -0.14
SOX2P48431 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
SOX2P48431 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.19□□□□□ -0.14
SOX2P48431 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 AC006486.2-201ENST00000624246 2199 ntBASIC14.19□□□□□ -0.14
SOX2P48431 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOX2P48431 AC087481.3-201ENST00000602886 1894 ntBASIC14.18□□□□□ -0.14
SOX2P48431 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOX2P48431 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.18□□□□□ -0.14
SOX2P48431 TMBIM7P-203ENST00000641617 1718 ntBASIC14.18□□□□□ -0.14
SOX2P48431 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SOX2P48431 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOX2P48431 AC138035.3-201ENST00000622706 2791 ntBASIC14.18□□□□□ -0.14
SOX2P48431 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.18□□□□□ -0.14
SOX2P48431 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.18□□□□□ -0.14
SOX2P48431 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.18□□□□□ -0.14
SOX2P48431 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
SOX2P48431 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOX2P48431 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.18□□□□□ -0.14
SOX2P48431 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SOX2P48431 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOX2P48431 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.18□□□□□ -0.14
SOX2P48431 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SOX2P48431 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SOX2P48431 HMGA1P7-201ENST00000406908 502 ntBASIC14.18□□□□□ -0.14
SOX2P48431 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.18□□□□□ -0.14
SOX2P48431 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SOX2P48431 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOX2P48431 AC073648.2-201ENST00000510116 352 ntBASIC14.18□□□□□ -0.14
SOX2P48431 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.18□□□□□ -0.14
SOX2P48431 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.18□□□□□ -0.14
SOX2P48431 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.18□□□□□ -0.14
SOX2P48431 AL356488.2-201ENST00000602755 427 ntBASIC14.18□□□□□ -0.14
SOX2P48431 AL445228.2-201ENST00000605589 952 ntBASIC14.18□□□□□ -0.14
SOX2P48431 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
SOX2P48431 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SOX2P48431 ACTL9-202ENST00000612068 1252 ntBASIC14.18□□□□□ -0.14
SOX2P48431 AC004790.2-201ENST00000623588 572 ntBASIC14.18□□□□□ -0.14
SOX2P48431 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.18□□□□□ -0.14
SOX2P48431 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOX2P48431 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
SOX2P48431 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SOX2P48431 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOX2P48431 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOX2P48431 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.18□□□□□ -0.14
SOX2P48431 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SOX2P48431 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.18□□□□□ -0.14
SOX2P48431 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SOX2P48431 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOX2P48431 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms