Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC090616.6-203ENST00000579186 1945 ntBASIC16.8■□□□□ 0.28
SLC1A1P43005 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A1P43005 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A1P43005 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC1A1P43005 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A1P43005 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A1P43005 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
SLC1A1P43005 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC1A1P43005 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A1P43005 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A1P43005 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC1A1P43005 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC1A1P43005 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
SLC1A1P43005 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A1P43005 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SLC1A1P43005 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC1A1P43005 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A1P43005 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A1P43005 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC1A1P43005 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 ADH5P3-201ENST00000433842 1137 ntBASIC16.79■□□□□ 0.28
SLC1A1P43005 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A1P43005 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC1A1P43005 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC1A1P43005 RNA5SP410-201ENST00000516285 106 ntBASIC16.79■□□□□ 0.28
SLC1A1P43005 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC1A1P43005 KRT8P23-201ENST00000560090 1207 ntBASIC16.79■□□□□ 0.28
SLC1A1P43005 AC243562.1-201ENST00000560672 389 ntBASIC16.79■□□□□ 0.28
SLC1A1P43005 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC1A1P43005 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC1A1P43005 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A1P43005 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A1P43005 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A1P43005 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A1P43005 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC1A1P43005 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A1P43005 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SLC1A1P43005 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC1A1P43005 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A1P43005 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.78■□□□□ 0.28
SLC1A1P43005 NFIC-211ENST00000641145 8399 ntBASIC16.78■□□□□ 0.28
SLC1A1P43005 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
SLC1A1P43005 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A1P43005 AC144831.1-201ENST00000573312 2656 ntBASIC16.78■□□□□ 0.28
SLC1A1P43005 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SLC1A1P43005 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SLC1A1P43005 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A1P43005 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SLC1A1P43005 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 HLA-H-201ENST00000383620 1096 ntBASIC16.78■□□□□ 0.28
SLC1A1P43005 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.78■□□□□ 0.28
SLC1A1P43005 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A1P43005 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC1A1P43005 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC1A1P43005 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A1P43005 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
SLC1A1P43005 LINC01225-203ENST00000563550 1244 ntBASIC16.78■□□□□ 0.28
SLC1A1P43005 AC040169.1-201ENST00000565382 521 ntBASIC16.78■□□□□ 0.28
SLC1A1P43005 AP000842.3-202ENST00000569238 1080 ntBASIC16.78■□□□□ 0.28
SLC1A1P43005 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 AC026120.1-201ENST00000611536 926 ntBASIC16.78■□□□□ 0.28
SLC1A1P43005 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A1P43005 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC1A1P43005 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A1P43005 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SLC1A1P43005 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
SLC1A1P43005 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SLC1A1P43005 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A1P43005 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC1A1P43005 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A1P43005 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SLC1A1P43005 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A1P43005 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A1P43005 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A1P43005 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms