Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC022532.1-201ENST00000624563 1728 ntBASIC16.82■□□□□ 0.28
MMP8P22894 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.82■□□□□ 0.28
MMP8P22894 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MMP8P22894 AZGP1P1-201ENST00000411909 902 ntBASIC16.82■□□□□ 0.28
MMP8P22894 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.82■□□□□ 0.28
MMP8P22894 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
MMP8P22894 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.82■□□□□ 0.28
MMP8P22894 HIST3H2BA-201ENST00000436555 524 ntBASIC16.82■□□□□ 0.28
MMP8P22894 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.82■□□□□ 0.28
MMP8P22894 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.82■□□□□ 0.28
MMP8P22894 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.82■□□□□ 0.28
MMP8P22894 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.82■□□□□ 0.28
MMP8P22894 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.82■□□□□ 0.28
MMP8P22894 HNRNPUP1-201ENST00000554987 333 ntBASIC16.82■□□□□ 0.28
MMP8P22894 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.82■□□□□ 0.28
MMP8P22894 AC097359.3-201ENST00000603982 1210 ntBASIC16.82■□□□□ 0.28
MMP8P22894 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 SSR4P1-203ENST00000599569 2260 ntBASIC16.82■□□□□ 0.28
MMP8P22894 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MMP8P22894 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.82■□□□□ 0.28
MMP8P22894 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MMP8P22894 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP8P22894 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MMP8P22894 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
MMP8P22894 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
MMP8P22894 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP8P22894 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MMP8P22894 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MMP8P22894 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP8P22894 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MMP8P22894 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP8P22894 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.81■□□□□ 0.28
MMP8P22894 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MMP8P22894 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
MMP8P22894 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MMP8P22894 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MMP8P22894 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MMP8P22894 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MMP8P22894 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.81■□□□□ 0.28
MMP8P22894 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP8P22894 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MMP8P22894 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP8P22894 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP8P22894 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP8P22894 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.81■□□□□ 0.28
MMP8P22894 AC109322.1-201ENST00000524499 1264 ntBASIC16.81■□□□□ 0.28
MMP8P22894 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.81■□□□□ 0.28
MMP8P22894 AC069262.1-201ENST00000539058 672 ntBASIC16.81■□□□□ 0.28
MMP8P22894 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.81■□□□□ 0.28
MMP8P22894 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
MMP8P22894 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.81■□□□□ 0.28
MMP8P22894 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 LINC00628-201ENST00000628516 1289 ntBASIC16.81■□□□□ 0.28
MMP8P22894 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP8P22894 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 AC126177.1-201ENST00000547829 2218 ntBASIC16.81■□□□□ 0.28
MMP8P22894 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP8P22894 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.81■□□□□ 0.28
MMP8P22894 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.81■□□□□ 0.28
MMP8P22894 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MMP8P22894 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 AC136621.1-201ENST00000624017 2304 ntBASIC16.8■□□□□ 0.28
MMP8P22894 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms