Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CTLA4P16410 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.25□□□□□ -0.13
CTLA4P16410 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.25□□□□□ -0.13
CTLA4P16410 AC136621.1-201ENST00000624017 2304 ntBASIC14.25□□□□□ -0.13
CTLA4P16410 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.25□□□□□ -0.13
CTLA4P16410 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.25□□□□□ -0.13
CTLA4P16410 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 AC022532.1-201ENST00000624563 1728 ntBASIC14.25□□□□□ -0.13
CTLA4P16410 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CTLA4P16410 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.25□□□□□ -0.13
CTLA4P16410 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.25□□□□□ -0.13
CTLA4P16410 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.25□□□□□ -0.13
CTLA4P16410 HTR5BP-201ENST00000430851 1154 ntBASIC14.25□□□□□ -0.13
CTLA4P16410 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.25□□□□□ -0.13
CTLA4P16410 MKNK2P1-201ENST00000437526 628 ntBASIC14.25□□□□□ -0.13
CTLA4P16410 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CTLA4P16410 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.25□□□□□ -0.13
CTLA4P16410 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.25□□□□□ -0.13
CTLA4P16410 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.25□□□□□ -0.13
CTLA4P16410 IGHV3-62-201ENST00000520057 340 ntBASIC14.25□□□□□ -0.13
CTLA4P16410 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.25□□□□□ -0.13
CTLA4P16410 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CTLA4P16410 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.25□□□□□ -0.13
CTLA4P16410 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.25□□□□□ -0.13
CTLA4P16410 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.25□□□□□ -0.13
CTLA4P16410 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.25□□□□□ -0.13
CTLA4P16410 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.25□□□□□ -0.13
CTLA4P16410 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.25□□□□□ -0.13
CTLA4P16410 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTLA4P16410 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.25□□□□□ -0.13
CTLA4P16410 SSR4P1-203ENST00000599569 2260 ntBASIC14.25□□□□□ -0.13
CTLA4P16410 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.25□□□□□ -0.13
CTLA4P16410 AC020658.6-201ENST00000623564 1870 ntBASIC14.25□□□□□ -0.13
CTLA4P16410 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CTLA4P16410 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.24□□□□□ -0.13
CTLA4P16410 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CTLA4P16410 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.24□□□□□ -0.13
CTLA4P16410 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CTLA4P16410 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.24□□□□□ -0.13
CTLA4P16410 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 HLA-H-201ENST00000383620 1096 ntBASIC14.24□□□□□ -0.13
CTLA4P16410 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.24□□□□□ -0.13
CTLA4P16410 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.24□□□□□ -0.13
CTLA4P16410 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.24□□□□□ -0.13
CTLA4P16410 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.24□□□□□ -0.13
CTLA4P16410 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.24□□□□□ -0.13
CTLA4P16410 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.24□□□□□ -0.13
CTLA4P16410 KRT8P23-201ENST00000560090 1207 ntBASIC14.24□□□□□ -0.13
CTLA4P16410 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.24□□□□□ -0.13
CTLA4P16410 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CTLA4P16410 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.24□□□□□ -0.13
CTLA4P16410 MTDHP5-201ENST00000598980 586 ntBASIC14.24□□□□□ -0.13
CTLA4P16410 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CTLA4P16410 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CTLA4P16410 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.24□□□□□ -0.13
CTLA4P16410 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.24□□□□□ -0.13
CTLA4P16410 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.24□□□□□ -0.13
CTLA4P16410 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 NFIC-211ENST00000641145 8399 ntBASIC14.24□□□□□ -0.13
CTLA4P16410 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 AL136982.4-201ENST00000437689 1740 ntBASIC14.24□□□□□ -0.13
CTLA4P16410 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.24□□□□□ -0.13
CTLA4P16410 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTLA4P16410 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.23□□□□□ -0.13
CTLA4P16410 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms