Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 AL035633.1-201ENST00000406139 838 ntBASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 AC092580.3-201ENST00000430932 139 ntBASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 AC241585.1-201ENST00000433527 519 ntBASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 TSPY16P-201ENST00000449843 468 ntBASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 AC138761.1-201ENST00000584393 385 ntBASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 AL512652.2-201ENST00000625156 1716 ntBASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 AC104640.1-201ENST00000562617 2109 ntBASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 AL035456.1-201ENST00000456064 1369 ntBASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.57□□□□□ -0.08
TMIGD3P0DMS9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 AC006538.1-201ENST00000567905 1585 ntBASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TMIGD3P0DMS9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMIGD3P0DMS9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms