Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH16O75309 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CDH16O75309 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH16O75309 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 FAAHP1-202ENST00000446499 1238 ntBASIC16.26■□□□□ 0.19
CDH16O75309 IGHV3-65-201ENST00000523210 341 ntBASIC16.26■□□□□ 0.19
CDH16O75309 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.26■□□□□ 0.19
CDH16O75309 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH16O75309 AC021087.4-201ENST00000563761 564 ntBASIC16.26■□□□□ 0.19
CDH16O75309 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH16O75309 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH16O75309 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.26■□□□□ 0.19
CDH16O75309 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CDH16O75309 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
CDH16O75309 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDH16O75309 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH16O75309 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CDH16O75309 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH16O75309 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDH16O75309 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDH16O75309 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH16O75309 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH16O75309 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH16O75309 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CDH16O75309 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH16O75309 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH16O75309 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH16O75309 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH16O75309 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH16O75309 AC004870.1-201ENST00000315132 882 ntBASIC16.25■□□□□ 0.19
CDH16O75309 HMGA1P7-201ENST00000406908 502 ntBASIC16.25■□□□□ 0.19
CDH16O75309 AC026396.1-201ENST00000419388 421 ntBASIC16.25■□□□□ 0.19
CDH16O75309 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.25■□□□□ 0.19
CDH16O75309 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CDH16O75309 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.25■□□□□ 0.19
CDH16O75309 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.25■□□□□ 0.19
CDH16O75309 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH16O75309 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH16O75309 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH16O75309 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH16O75309 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH16O75309 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH16O75309 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
CDH16O75309 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH16O75309 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH16O75309 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH16O75309 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH16O75309 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH16O75309 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH16O75309 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH16O75309 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH16O75309 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH16O75309 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CDH16O75309 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDH16O75309 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDH16O75309 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH16O75309 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDH16O75309 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH16O75309 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH16O75309 AC013726.1-201ENST00000563747 2285 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms