Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH17O14917 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PCDH17O14917 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDH17O14917 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDH17O14917 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.38■□□□□ 0.05
PCDH17O14917 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDH17O14917 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
PCDH17O14917 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
PCDH17O14917 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PCDH17O14917 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDH17O14917 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDH17O14917 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDH17O14917 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
PCDH17O14917 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 GPAA1P2-202ENST00000606848 1787 ntBASIC15.37■□□□□ 0.05
PCDH17O14917 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PCDH17O14917 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 BASP1P1-201ENST00000430708 665 ntBASIC15.37■□□□□ 0.05
PCDH17O14917 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDH17O14917 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDH17O14917 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PCDH17O14917 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDH17O14917 AC069120.2-201ENST00000524091 540 ntBASIC15.37■□□□□ 0.05
PCDH17O14917 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDH17O14917 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PCDH17O14917 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDH17O14917 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
PCDH17O14917 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PCDH17O14917 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH17O14917 AP3S2-216ENST00000617003 1561 ntBASIC15.36■□□□□ 0.05
PCDH17O14917 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDH17O14917 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
PCDH17O14917 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH17O14917 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDH17O14917 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH17O14917 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDH17O14917 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
PCDH17O14917 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH17O14917 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDH17O14917 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDH17O14917 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH17O14917 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDH17O14917 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.36■□□□□ 0.05
PCDH17O14917 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDH17O14917 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.36■□□□□ 0.05
PCDH17O14917 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PCDH17O14917 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDH17O14917 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH17O14917 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDH17O14917 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH17O14917 AC008677.1-201ENST00000519230 1561 ntBASIC15.36■□□□□ 0.05
PCDH17O14917 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDH17O14917 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH17O14917 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
PCDH17O14917 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH17O14917 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
PCDH17O14917 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH17O14917 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH17O14917 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDH17O14917 AC092384.3-202ENST00000564646 2873 ntBASIC15.35■□□□□ 0.05
PCDH17O14917 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDH17O14917 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH17O14917 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms