Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LRCOL1A6NCL2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
LRCOL1A6NCL2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC10.83□□□□□ -0.68
LRCOL1A6NCL2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRCOL1A6NCL2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRCOL1A6NCL2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRCOL1A6NCL2 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LRCOL1A6NCL2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 GOLGA2P9-201ENST00000596977 1937 ntBASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 FO538757.1-201ENST00000623083 1397 ntBASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 TREML5P-201ENST00000421694 576 ntBASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 FAM8A3P-201ENST00000427218 844 ntBASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 AC093724.1-201ENST00000448659 1027 ntBASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 AC069120.2-201ENST00000524091 540 ntBASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 MIR3197-201ENST00000582241 73 ntBASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 AL158211.3-201ENST00000607385 239 ntBASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 AC007967.4-201ENST00000614700 386 ntBASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRCOL1A6NCL2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRCOL1A6NCL2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms