Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 FO393414.2-201ENST00000405153 598 ntBASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 AC136604.1-201ENST00000418535 575 ntBASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 AL138828.2-201ENST00000615812 383 ntBASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BLOC1S4Q9NUP1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 CETN4P-206ENST00000642099 2168 ntBASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 KLF2P3-201ENST00000451977 1087 ntBASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 GPALPP1-207ENST00000611650 899 ntBASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BLOC1S4Q9NUP1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
BLOC1S4Q9NUP1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
BLOC1S4Q9NUP1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BLOC1S4Q9NUP1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.77■□□□□ 0.43
BLOC1S4Q9NUP1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BLOC1S4Q9NUP1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.77■□□□□ 0.43
BLOC1S4Q9NUP1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
BLOC1S4Q9NUP1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 AC105250.1-201ENST00000509378 2057 ntBASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 AL607033.1-201ENST00000623900 1599 ntBASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 AC092580.3-201ENST00000430932 139 ntBASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 HLA-V-204ENST00000476601 1289 ntBASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 AC125807.1-201ENST00000483097 614 ntBASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.76■□□□□ 0.43
BLOC1S4Q9NUP1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms