Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 SSR4P1-203ENST00000599569 2260 ntBASIC13.98□□□□□ -0.17
CCDC107Q8WV48 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 AC016027.1-202ENST00000607927 1699 ntBASIC13.98□□□□□ -0.17
CCDC107Q8WV48 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC107Q8WV48 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 AC087386.2-201ENST00000623212 4637 ntBASIC13.97□□□□□ -0.17
CCDC107Q8WV48 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 SNX33P1-201ENST00000592116 1762 ntBASIC13.97□□□□□ -0.17
CCDC107Q8WV48 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 PMS2P1-201ENST00000431037 1228 ntBASIC13.97□□□□□ -0.17
CCDC107Q8WV48 RPS15P9-201ENST00000494093 319 ntBASIC13.97□□□□□ -0.17
CCDC107Q8WV48 RNPS1P1-201ENST00000507437 918 ntBASIC13.97□□□□□ -0.17
CCDC107Q8WV48 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 AC131009.4-201ENST00000624048 1740 ntBASIC13.97□□□□□ -0.17
CCDC107Q8WV48 AL512652.2-201ENST00000625156 1716 ntBASIC13.97□□□□□ -0.17
CCDC107Q8WV48 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.97□□□□□ -0.17
CCDC107Q8WV48 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 AC007292.2-201ENST00000593524 1812 ntBASIC13.97□□□□□ -0.17
CCDC107Q8WV48 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.97□□□□□ -0.17
CCDC107Q8WV48 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 AC138035.3-201ENST00000622706 2791 ntBASIC13.96□□□□□ -0.17
CCDC107Q8WV48 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 REXO1L8P-201ENST00000604378 1897 ntBASIC13.96□□□□□ -0.17
CCDC107Q8WV48 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 EMBP1-201ENST00000458200 901 ntBASIC13.96□□□□□ -0.17
CCDC107Q8WV48 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC107Q8WV48 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms