Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.81■□□□□ 0.28
IRX4P78413 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.81■□□□□ 0.28
IRX4P78413 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.81■□□□□ 0.28
IRX4P78413 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.81■□□□□ 0.28
IRX4P78413 IGHV3-62-201ENST00000520057 340 ntBASIC16.81■□□□□ 0.28
IRX4P78413 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.81■□□□□ 0.28
IRX4P78413 AC026150.2-201ENST00000564693 1156 ntBASIC16.81■□□□□ 0.28
IRX4P78413 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.81■□□□□ 0.28
IRX4P78413 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.81■□□□□ 0.28
IRX4P78413 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
IRX4P78413 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.81■□□□□ 0.28
IRX4P78413 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
IRX4P78413 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
IRX4P78413 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 UXT-AS1-201ENST00000590504 1525 ntBASIC16.8■□□□□ 0.28
IRX4P78413 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.8■□□□□ 0.28
IRX4P78413 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
IRX4P78413 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.8■□□□□ 0.28
IRX4P78413 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.8■□□□□ 0.28
IRX4P78413 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.8■□□□□ 0.28
IRX4P78413 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.8■□□□□ 0.28
IRX4P78413 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.8■□□□□ 0.28
IRX4P78413 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.8■□□□□ 0.28
IRX4P78413 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.8■□□□□ 0.28
IRX4P78413 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.8■□□□□ 0.28
IRX4P78413 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.8■□□□□ 0.28
IRX4P78413 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.8■□□□□ 0.28
IRX4P78413 AL008721.1-201ENST00000609964 604 ntBASIC16.8■□□□□ 0.28
IRX4P78413 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.8■□□□□ 0.28
IRX4P78413 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
IRX4P78413 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
IRX4P78413 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.8■□□□□ 0.28
IRX4P78413 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.8■□□□□ 0.28
IRX4P78413 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IRX4P78413 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
IRX4P78413 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX4P78413 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IRX4P78413 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.79■□□□□ 0.28
IRX4P78413 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX4P78413 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IRX4P78413 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
IRX4P78413 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX4P78413 AC068418.2-201ENST00000577309 3703 ntBASIC16.79■□□□□ 0.28
IRX4P78413 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX4P78413 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.79■□□□□ 0.28
IRX4P78413 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX4P78413 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.79■□□□□ 0.28
IRX4P78413 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.79■□□□□ 0.28
IRX4P78413 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX4P78413 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
IRX4P78413 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX4P78413 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.79■□□□□ 0.28
IRX4P78413 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
IRX4P78413 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
IRX4P78413 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.79■□□□□ 0.28
IRX4P78413 AC007274.1-201ENST00000439805 662 ntBASIC16.79■□□□□ 0.28
IRX4P78413 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.79■□□□□ 0.28
IRX4P78413 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.79■□□□□ 0.28
IRX4P78413 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.79■□□□□ 0.28
IRX4P78413 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
IRX4P78413 LINC01225-203ENST00000563550 1244 ntBASIC16.79■□□□□ 0.28
IRX4P78413 MIR4515-201ENST00000584082 81 ntBASIC16.79■□□□□ 0.28
IRX4P78413 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
IRX4P78413 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.79■□□□□ 0.28
IRX4P78413 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.79■□□□□ 0.28
IRX4P78413 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
IRX4P78413 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IRX4P78413 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.79■□□□□ 0.28
IRX4P78413 MIR600HG-201ENST00000449175 5984 ntBASIC16.79■□□□□ 0.28
IRX4P78413 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
IRX4P78413 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms