Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 TOP3BP1-201ENST00000420768 1380 ntBASIC9.97□□□□□ -0.81
PDE6GP18545 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
PDE6GP18545 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
PDE6GP18545 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC9.97□□□□□ -0.81
PDE6GP18545 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PDE6GP18545 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
PDE6GP18545 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC9.97□□□□□ -0.81
PDE6GP18545 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PDE6GP18545 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
PDE6GP18545 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC9.97□□□□□ -0.81
PDE6GP18545 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PDE6GP18545 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
PDE6GP18545 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
PDE6GP18545 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
PDE6GP18545 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PDE6GP18545 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PDE6GP18545 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PDE6GP18545 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC9.96□□□□□ -0.81
PDE6GP18545 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
PDE6GP18545 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC9.96□□□□□ -0.81
PDE6GP18545 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC9.96□□□□□ -0.81
PDE6GP18545 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC9.96□□□□□ -0.81
PDE6GP18545 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
PDE6GP18545 RER1-203ENST00000378513 3000 ntTSL 3 BASIC9.96□□□□□ -0.81
PDE6GP18545 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
PDE6GP18545 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.81
PDE6GP18545 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 C18orf15-201ENST00000623680 2534 ntBASIC9.96□□□□□ -0.81
PDE6GP18545 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC9.96□□□□□ -0.81
PDE6GP18545 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC9.96□□□□□ -0.81
PDE6GP18545 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
PDE6GP18545 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
PDE6GP18545 AC112693.3-201ENST00000624819 1983 ntBASIC9.96□□□□□ -0.81
PDE6GP18545 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PDE6GP18545 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 GUK1-205ENST00000366722 850 ntTSL 3 BASIC9.96□□□□□ -0.82
PDE6GP18545 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC9.96□□□□□ -0.82
PDE6GP18545 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC9.96□□□□□ -0.82
PDE6GP18545 FAM8A3P-201ENST00000427218 844 ntBASIC9.96□□□□□ -0.82
PDE6GP18545 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC9.96□□□□□ -0.82
PDE6GP18545 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 RN7SL471P-201ENST00000580476 299 ntBASIC9.96□□□□□ -0.82
PDE6GP18545 USF2-205ENST00000594064 1179 ntTSL 2 BASIC9.96□□□□□ -0.82
PDE6GP18545 CD177P1-201ENST00000606252 935 ntBASIC9.96□□□□□ -0.82
PDE6GP18545 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC9.96□□□□□ -0.82
PDE6GP18545 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC9.96□□□□□ -0.82
PDE6GP18545 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC9.96□□□□□ -0.82
PDE6GP18545 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
PDE6GP18545 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
PDE6GP18545 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC9.96□□□□□ -0.82
PDE6GP18545 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
PDE6GP18545 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC9.96□□□□□ -0.82
PDE6GP18545 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 NIN-202ENST00000324330 4364 ntTSL 5 BASIC9.96□□□□□ -0.82
PDE6GP18545 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC9.96□□□□□ -0.82
PDE6GP18545 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC9.96□□□□□ -0.82
PDE6GP18545 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
PDE6GP18545 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
PDE6GP18545 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
PDE6GP18545 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC9.96□□□□□ -0.82
PDE6GP18545 AC010327.5-201ENST00000586923 3061 ntBASIC9.96□□□□□ -0.82
PDE6GP18545 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
PDE6GP18545 U82695.1-201ENST00000635752 1889 ntBASIC9.96□□□□□ -0.82
PDE6GP18545 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
PDE6GP18545 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
PDE6GP18545 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PDE6GP18545 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PDE6GP18545 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PDE6GP18545 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PDE6GP18545 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PDE6GP18545 AC009090.5-201ENST00000624886 2285 ntBASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms