Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
LCP1P13796 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.92■□□□□ 0.3
LCP1P13796 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.92■□□□□ 0.3
LCP1P13796 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.92■□□□□ 0.3
LCP1P13796 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LCP1P13796 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.92■□□□□ 0.3
LCP1P13796 AC027369.6-201ENST00000525520 931 ntBASIC16.92■□□□□ 0.3
LCP1P13796 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.92■□□□□ 0.3
LCP1P13796 AL079307.3-201ENST00000556114 283 ntBASIC16.92■□□□□ 0.3
LCP1P13796 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.92■□□□□ 0.3
LCP1P13796 AL138828.2-201ENST00000615812 383 ntBASIC16.92■□□□□ 0.3
LCP1P13796 AC073592.8-201ENST00000624126 511 ntBASIC16.92■□□□□ 0.3
LCP1P13796 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 AC069224.1-201ENST00000566372 1715 ntBASIC16.92■□□□□ 0.3
LCP1P13796 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
LCP1P13796 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
LCP1P13796 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.92■□□□□ 0.3
LCP1P13796 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LCP1P13796 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 AP001282.1-201ENST00000531301 1499 ntBASIC16.92■□□□□ 0.3
LCP1P13796 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
LCP1P13796 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.91■□□□□ 0.3
LCP1P13796 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LCP1P13796 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
LCP1P13796 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
LCP1P13796 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 AC004987.2-201ENST00000395959 1148 ntBASIC16.91■□□□□ 0.3
LCP1P13796 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.91■□□□□ 0.3
LCP1P13796 RPL37AP1-201ENST00000412502 279 ntBASIC16.91■□□□□ 0.3
LCP1P13796 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
LCP1P13796 AC097493.3-201ENST00000509725 367 ntBASIC16.91■□□□□ 0.3
LCP1P13796 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.91■□□□□ 0.3
LCP1P13796 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.91■□□□□ 0.3
LCP1P13796 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.91■□□□□ 0.3
LCP1P13796 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCP1P13796 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.91■□□□□ 0.3
LCP1P13796 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.91■□□□□ 0.3
LCP1P13796 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.91■□□□□ 0.3
LCP1P13796 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LCP1P13796 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.9■□□□□ 0.3
LCP1P13796 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LCP1P13796 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.9■□□□□ 0.3
LCP1P13796 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.9■□□□□ 0.3
LCP1P13796 AC092580.3-201ENST00000430932 139 ntBASIC16.9■□□□□ 0.3
LCP1P13796 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.9■□□□□ 0.3
LCP1P13796 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.9■□□□□ 0.3
LCP1P13796 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.9■□□□□ 0.3
LCP1P13796 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.9■□□□□ 0.3
LCP1P13796 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.9■□□□□ 0.3
LCP1P13796 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.9■□□□□ 0.3
LCP1P13796 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LCP1P13796 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.9■□□□□ 0.3
LCP1P13796 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.9■□□□□ 0.3
LCP1P13796 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.9■□□□□ 0.3
LCP1P13796 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.9■□□□□ 0.3
LCP1P13796 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.9■□□□□ 0.3
LCP1P13796 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LCP1P13796 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.9■□□□□ 0.3
LCP1P13796 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms