Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.34□□□□□ -0.11
PFDN1O60925 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PFDN1O60925 KRT8P47-201ENST00000604727 1398 ntBASIC14.34□□□□□ -0.11
PFDN1O60925 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.33□□□□□ -0.11
PFDN1O60925 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PFDN1O60925 LINC00167-201ENST00000530583 1419 ntBASIC14.33□□□□□ -0.11
PFDN1O60925 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PFDN1O60925 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
PFDN1O60925 FP325330.2-201ENST00000624219 5630 ntBASIC14.33□□□□□ -0.12
PFDN1O60925 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PFDN1O60925 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.33□□□□□ -0.12
PFDN1O60925 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.33□□□□□ -0.12
PFDN1O60925 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 MIR648-201ENST00000385046 94 ntBASIC14.33□□□□□ -0.12
PFDN1O60925 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.33□□□□□ -0.12
PFDN1O60925 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.33□□□□□ -0.12
PFDN1O60925 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.33□□□□□ -0.12
PFDN1O60925 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PFDN1O60925 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC14.33□□□□□ -0.12
PFDN1O60925 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC14.33□□□□□ -0.12
PFDN1O60925 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.33□□□□□ -0.12
PFDN1O60925 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
PFDN1O60925 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PFDN1O60925 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.33□□□□□ -0.12
PFDN1O60925 AC092127.1-201ENST00000567093 3455 ntBASIC14.33□□□□□ -0.12
PFDN1O60925 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PFDN1O60925 CSPG4P11-201ENST00000560634 4910 ntBASIC14.33□□□□□ -0.12
PFDN1O60925 AC090616.6-203ENST00000579186 1945 ntBASIC14.33□□□□□ -0.12
PFDN1O60925 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PFDN1O60925 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.33□□□□□ -0.12
PFDN1O60925 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.32□□□□□ -0.12
PFDN1O60925 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
PFDN1O60925 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PFDN1O60925 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PFDN1O60925 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.32□□□□□ -0.12
PFDN1O60925 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.32□□□□□ -0.12
PFDN1O60925 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC14.32□□□□□ -0.12
PFDN1O60925 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
PFDN1O60925 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PFDN1O60925 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
PFDN1O60925 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
PFDN1O60925 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.32□□□□□ -0.12
PFDN1O60925 AL355355.2-201ENST00000442321 338 ntBASIC14.32□□□□□ -0.12
PFDN1O60925 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.32□□□□□ -0.12
PFDN1O60925 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.32□□□□□ -0.12
PFDN1O60925 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.32□□□□□ -0.12
PFDN1O60925 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.32□□□□□ -0.12
PFDN1O60925 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.32□□□□□ -0.12
PFDN1O60925 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.32□□□□□ -0.12
PFDN1O60925 AC069544.1-201ENST00000609399 999 ntBASIC14.32□□□□□ -0.12
PFDN1O60925 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.32□□□□□ -0.12
PFDN1O60925 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PFDN1O60925 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PFDN1O60925 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
PFDN1O60925 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.32□□□□□ -0.12
PFDN1O60925 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.32□□□□□ -0.12
PFDN1O60925 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
PFDN1O60925 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PFDN1O60925 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms